RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SLC5A10A0PJK1 596 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 HEATR9A2RTY3 570 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 C2orf74A8MZ97 194 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 MKRN2OSH3BPM6 223 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 QSOX1O00391 747 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 OR1I1O60431 355 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 FTH1P02794 183 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 KLK3P07288 261 aaPredicted RBP9.42□□□□□ -0.9
VPS41-201ENST00000265745 TPBGLP0DKB5 382 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 ST6GAL1P15907 406 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 ADRA1DP25100 572 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 RORAP35398 523 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 FDFT1P37268 417 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 PMS2P54278 862 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 GSDMDP57764 484 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 RPS18P62269 152 aaKnown RBP9.42□□□□□ -0.9
VPS41-201ENST00000265745 RPS15P62841 145 aaKnown RBP9.42□□□□□ -0.9
VPS41-201ENST00000265745 PLOD1Q02809 727 aaPredicted RBP9.42□□□□□ -0.9
VPS41-201ENST00000265745 ACVR1Q04771 509 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 ABRQ12979 859 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 SEMA5AQ13591 1074 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 UGT8Q16880 541 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 TSTD2Q5T7W7 516 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 LYPLAL1Q5VWZ2 237 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 LCN10Q6JVE6 187 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 UNC5AQ6ZN44 842 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
VPS41-201ENST00000265745 SYVN1Q86TM6 617 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 PRUNE1Q86TP1 453 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 APLFQ8IW19 511 aaPredicted RBP9.42□□□□□ -0.9
VPS41-201ENST00000265745 OR1L3Q8NH93 324 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 THAP4Q8WY91 577 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 CPT1BQ92523 772 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 MRRFQ96E11 262 aaKnown RBP9.42□□□□□ -0.9
VPS41-201ENST00000265745 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 ZNF778Q96MU6 729 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 RANBP9Q96S59 729 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 HGH1Q9BTY7 390 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 TSGA10Q9BZW7 698 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 CHST8Q9H2A9 424 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 CASS4Q9NQ75 786 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 RAB6BQ9NRW1 208 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 ACTR10Q9NZ32 417 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 SLC2A6Q9UGQ3 507 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 SERTAD3Q9UJW9 196 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 ZNF148Q9UQR1 794 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 ASF1AQ9Y294 204 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 TP53TG5Q9Y2B4 290 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 MAN2B2Q9Y2E5 1009 aa9.42□□□□□ -0.9
VPS41-201ENST00000265745 NBASA2RRP1 2371 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 TMEM150CB9EJG8 249 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 E7EVH7 732 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 KRT86O43790 486 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 RFPL1O75677 317 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 DNAJB5O75953 348 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 GAS8O95995 478 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 GOT2P00505 430 aaKnown RBP9.41□□□□□ -0.9
VPS41-201ENST00000265745 RAB40ALP0C0E4 278 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 OR56A5P0C7T3 313 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 ETS1P14921 441 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 PVRP15151 417 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 NR1D1P20393 614 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
VPS41-201ENST00000265745 LMAN1P49257 510 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 KLRB1Q12918 225 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 SNX1Q13596 522 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 IL10RAQ13651 578 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 BRD3Q15059 726 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 RPS6KA1Q15418 735 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 IGFBP7Q16270 282 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 CCNG2Q16589 344 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 SEL1L2Q5TEA6 688 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 MEI1Q5TIA1 1274 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 SPESP1Q6UW49 350 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 NAPRTQ6XQN6 538 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 PPP1R21Q6ZMI0 780 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 CDHR3Q6ZTQ4 885 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 ZNF534Q76KX8 674 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 NLRP9Q7RTR0 991 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 TBC1D21Q8IYX1 336 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 DSELQ8IZU8 1212 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 GLIS1Q8NBF1 620 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 OR5AR1Q8NGP9 310 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 OR4L1Q8NH43 312 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 FLVCR1-AS1Q8TAF5 88 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 ELMO1Q92556 727 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.41□□□□□ -0.91e-6■■■■□ 20.6
VPS41-201ENST00000265745 OR2A14Q96R47 310 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 TTC1Q99614 292 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 NLNQ9BYT8 704 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 TRIM55Q9BYV6 548 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 KLHL25Q9H0H3 589 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 ACTR5Q9H9F9 607 aaPredicted RBP9.41□□□□□ -0.9
VPS41-201ENST00000265745 FANCEQ9HB96 536 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 FAM60AQ9NP50 221 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 PCMTD2Q9NV79 361 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 OR6C2Q9NZP2 312 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 POLG2Q9UHN1 485 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 ICKQ9UPZ9 632 aa9.41□□□□□ -0.9
VPS41-201ENST00000265745 ZFC3H1O60293 1989 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms