RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 C12orf29Q8N999 325 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 CLEC4CQ8WTT0 213 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 KHSRPQ92945 711 aaKnown RBP eCLIP8.61□□□□□ -1.03
VAPB-201ENST00000265619 MCCC1Q96RQ3 725 aaPredicted RBP8.61□□□□□ -1.03
VAPB-201ENST00000265619 ELOVL4Q9GZR5 314 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 ABHD16BQ9H3Z7 469 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 GSTO2Q9H4Y5 243 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 CDHR5Q9HBB8 845 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 NOD1Q9Y239 953 aa8.61□□□□□ -1.03
VAPB-201ENST00000265619 A0A1W2PQ09 198 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 PIP5K1BO14986 540 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 LINC00032P0C843 101 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 SDC4P31431 198 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 KRT20P35900 424 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 IL12RB1P42701 662 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 MAGEA11P43364 429 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 TAS2R39P59534 338 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 DEFA1P59665 94 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 DEFA3P59666 94 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 PSMD5Q16401 504 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 RBM20Q5T481 1227 aaKnown RBP8.6□□□□□ -1.03
VAPB-201ENST00000265619 SYPL2Q5VXT5 272 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 SCIMPQ6UWF3 145 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 ARSKQ6UWY0 536 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 CFAP77Q6ZQR2 320 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 ARHGAP36Q6ZRI8 547 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 OR7D4Q8NG98 312 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 OR52H1Q8NGJ2 320 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 FBLIM1Q8WUP2 373 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 NIF3L1Q9GZT8 377 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 CASS4Q9NQ75 786 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 REV1Q9UBZ9 1251 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 SHROOM3Q8TF72 1996 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 PPM1BO75688 479 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 CST1P01037 141 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 ARL2P36404 184 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 UFM1P61960 85 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 SH3BP2P78314 561 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 CDH24Q86UP0 819 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 DNAAF3Q8N9W5 541 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 OR8H1Q8NGG4 311 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 MAGEB10Q96LZ2 347 aaPredicted RBP8.6□□□□□ -1.03
VAPB-201ENST00000265619 PPM1MQ96MI6 270 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 NSUN5Q96P11 429 aaKnown RBP8.6□□□□□ -1.03
VAPB-201ENST00000265619 CSPG4P5Q96PW8 444 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 BCL7BQ9BQE9 202 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 CHCHD6Q9BRQ6 235 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 XYLT2Q9H1B5 865 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 RPF1Q9H9Y2 349 aaKnown RBP8.6□□□□□ -1.03
VAPB-201ENST00000265619 CYP3A43Q9HB55 503 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 TAS2R16Q9NYV7 291 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 ZNF224Q9NZL3 707 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 MKL2Q9ULH7 1088 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
VAPB-201ENST00000265619 RNF6Q9Y252 685 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 ACOT9Q9Y305 439 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 TRAV19A0A0A6YYK7 116 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 TREHO43280 583 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 DNAJB5O75953 348 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 MMP3P08254 477 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 TNFSF8P32971 234 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 FLT3LGP49771 235 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 MAP2K5Q13163 448 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 PTPRCAPQ14761 206 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 FAM171BQ6P995 826 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 KDELC1Q6UW63 502 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 Q6ZPB1 254 aaPredicted RBP8.6□□□□□ -1.03
VAPB-201ENST00000265619 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 SCUBE3Q8IX30 993 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 PLPP6Q8IY26 295 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 DCP1BQ8IZD4 617 aaKnown RBP8.6□□□□□ -1.03
VAPB-201ENST00000265619 OR8H3Q8N146 312 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 C7orf31Q8N865 590 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 GPR151Q8TDV0 419 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 RIBC2Q9H4K1 309 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 PKP3Q9Y446 797 aa8.6□□□□□ -1.03
VAPB-201ENST00000265619 TRIP12Q14669 1992 aaPredicted RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 MYADML2A6NDP7 307 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 CLDN24A6NM45 220 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 B4DXG7 233 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ZNF623O75123 536 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 SIX3O95343 332 aaPredicted RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 MED26O95402 600 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 ITGB3P05106 788 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 NFICP08651 508 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 TNNI3P19429 210 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 EVI2BP34910 448 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 NRIP1P48552 1158 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 TBX4P57082 545 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 CYP4F2P78329 520 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 CYP4F3Q08477 520 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 FADDQ13158 208 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 GALEQ14376 348 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 SEMA3AQ14563 771 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 MXD4Q14582 209 aaPredicted RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 ZNF648Q5T619 568 aaPredicted RBP8.59□□□□□ -1.03
VAPB-201ENST00000265619 KIAA1841Q6NSI8 718 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 BLOC1S3Q6QNY0 202 aa8.59□□□□□ -1.03
VAPB-201ENST00000265619 PIWIL4Q7Z3Z4 852 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms