RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PYDC1Q8WXC3 89 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 FAM3CQ92520 227 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 VPS33AQ96AX1 596 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 NUSAP1Q9BXS6 441 aaKnown RBP9.1□□□□□ -0.95
SSR3-201ENST00000265044 KCNK12Q9HB15 430 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 CA14Q9ULX7 337 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 PLAGL1Q9UM63 463 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 TARM1B6A8C7 271 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 FPGTO14772 594 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 LIN7AO14910 233 aaPredicted RBP9.1□□□□□ -0.95
SSR3-201ENST00000265044 KDM1AO60341 852 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 NDUFS2O75306 463 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 CPSF4O95639 269 aaKnown RBP9.1□□□□□ -0.95
SSR3-201ENST00000265044 AOAHP28039 575 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 GRK3P35626 688 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 SUOXP51687 545 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 FOXD4Q12950 439 aaPredicted RBP9.1□□□□□ -0.95
SSR3-201ENST00000265044 CYP2A13Q16696 494 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 PAGE2BQ5JRK9 111 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 WASHC2DQ5SRD0 308 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 FOXJ1Q92949 421 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 CCDC138Q96M89 665 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 FAM129BQ96TA1 746 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 SLC17A9Q9BYT1 436 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 TMEM245Q9H330 911 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 IKZF3Q9UKT9 509 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 PIKFYVEQ9Y2I7 2098 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 LAMA3Q16787 3333 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 ANKDD1BA6NHY2 528 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 TCF3P15923 654 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 KELP23276 732 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 DGKEP52429 567 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 ERVPABLB-1P60509 514 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 CYP4F2P78329 520 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 TRIP10Q15642 601 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 VRK3Q8IV63 474 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 FAM156AQ8NDB6 213 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 VPS37AQ8NEZ2 397 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 RHBDF1Q96CC6 855 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 CXorf40BQ96DE9 158 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 ZNF382Q96SR6 550 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 PRPF18Q99633 342 aaKnown RBP9.1□□□□□ -0.95
SSR3-201ENST00000265044 VCX3BQ9H321 246 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 ZBTB26Q9HCK0 441 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 CCDC177Q9NQR7 707 aaPredicted RBP9.1□□□□□ -0.95
SSR3-201ENST00000265044 NCOR1O75376 2440 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 ISM1B1AKI9 464 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 UBFD1O14562 309 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 KRT36O76013 467 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 EGFP01133 1207 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 ENO2P09104 434 aaPredicted RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 DRD1P21728 446 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 S100A3P33764 101 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 EIF2DP41214 584 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 SLC7A2P52569 658 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 HK3P52790 923 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 NAA25Q14CX7 972 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 HENMT1Q5T8I9 393 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 LETMD1Q6P1Q0 360 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 SBSNQ6UWP8 590 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 SPATA19Q7Z5L4 167 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 THOC6Q86W42 341 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 C17orf64Q86WR6 236 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 DDHD1Q8NEL9 900 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 MKRN2Q9H000 416 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 C8orf33Q9H7E9 229 aaPredicted RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 FADS3Q9Y5Q0 445 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 TMEM202A6NGA9 273 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 GNGT2O14610 69 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 NPC1O15118 1278 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 SLC16A8O95907 504 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 FOSL2P15408 326 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 ADSLP30566 484 aaPredicted RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 CA5AP35218 305 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 ACTR1BP42025 376 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 MAPK9P45984 424 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 HTR6P50406 440 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 ACTR1AP61163 376 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 GALNT1Q10472 559 aaPredicted RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 RALGDSQ12967 914 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 MAPKAPK3Q16644 382 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 CYP2U1Q7Z449 544 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 KBTBD6Q86V97 674 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 TBC1D19Q8N5T2 526 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 TSTD1Q8NFU3 115 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 HM13Q8TCT9 377 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 C3orf30Q96M34 536 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 SLC39A3Q9BRY0 314 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 SLC12A9Q9BXP2 914 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 TRIM15Q9C019 465 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 BAG5Q9UL15 447 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 KANSL1LA0AUZ9 987 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 H0Y858 1186 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 ABCB1P08183 1280 aaPredicted RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 RPS17P08708 135 aaKnown RBP9.09□□□□□ -0.95
SSR3-201ENST00000265044 POU2F2P09086 479 aa9.09□□□□□ -0.95
SSR3-201ENST00000265044 ZNF8P17098 575 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms