RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CD36P16671 472 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 ATF6P18850 670 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PRKCHP24723 683 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 GLUD2P49448 558 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 RUNDC3AQ59EK9 446 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 MPP5Q8N3R9 675 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 C9IYK1 514 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 SMAD9O15198 467 aaKnown RBP17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PGAM2P15259 253 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 GJA9P57773 515 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 RPS14P62263 151 aaKnown RBP17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PRR5P85299 388 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 ACSBG2Q5FVE4 666 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF311Q5JNZ3 666 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 CLEC12AQ5QGZ9 265 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 TMEM220Q6QAJ8 160 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 OR6K6Q8NGW6 343 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 TAPBPLQ9BX59 468 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 H6PDO95479 791 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PAX3P23760 479 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PUM1Q14671 1186 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL5A3-201ENST00000264828 TCEAL6Q6IPX3 200 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 RAB2BQ8WUD1 216 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 TMCO6Q96DC7 493 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 YIPF4Q9BSR8 244 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 C1orf109Q9NX04 203 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 ACVR2AP27037 513 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PTGS2P35354 604 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 CHRNA4P43681 627 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PHC1P78364 1004 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PITPNAQ00169 270 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 UBXN11Q5T124 520 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 SH3PXD2AQ5TCZ1 1133 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PRSS58Q8IYP2 241 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 SPPL2BQ8TCT7 592 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 TFAP2BQ92481 460 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 SSU72Q9NP77 194 aaKnown RBP17.68■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF639Q9UID6 485 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 NR2E1Q9Y466 385 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 ITM2AO43736 263 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 OR7A10O76100 309 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 LDOC1O95751 146 aaPredicted RBP17.68■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF12P17014 697 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 FOXN2P32314 431 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 KLHDC10Q6PID8 442 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 QSOX2Q6ZRP7 698 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 MSANTD1Q6ZTZ1 278 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 CPA6Q8N4T0 437 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 RASSF5Q8WWW0 418 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 METTL21AQ8WXB1 218 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 PCED1BQ96HM7 432 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 GTF2IRD1Q9UHL9 959 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 SIGLEC1Q9BZZ2 1709 aa17.68■□□□□ 0.42
COL5A3-201ENST00000264828 SMIM35A0A1B0GVV1 85 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 KMOO15229 486 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 GATBO75879 557 aaKnown RBP17.67■□□□□ 0.42
COL5A3-201ENST00000264828 CHRNB2P17787 502 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 TIE1P35590 1138 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 CERS6Q6ZMG9 384 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 CLEC4CQ8WTT0 213 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 C8orf48Q96LL4 319 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 MTERF1Q99551 399 aaKnown RBP17.67■□□□□ 0.42
COL5A3-201ENST00000264828 POLR2J2Q9GZM3 115 aaKnown RBP17.67■□□□□ 0.42
COL5A3-201ENST00000264828 IL1RAPQ9NPH3 570 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 DNAJB9Q9UBS3 223 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 SPIN1Q9Y657 262 aaPredicted RBP17.67■□□□□ 0.42
COL5A3-201ENST00000264828 TSPAN1O60635 241 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 GSTT2BP0CG30 244 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 IL7RP16871 459 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 TMEM192Q8IY95 271 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 LNX2Q8N448 690 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 KXD1Q9BQD3 176 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 ANKRA2Q9H9E1 313 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 EBF2Q9HAK2 575 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 ALKBH4Q9NXW9 302 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 OR2AT4A6NND4 320 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 PDLIM1O00151 329 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 LINGO3P0C6S8 592 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 GPD2P43304 727 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 KHKP50053 298 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 TMEM198Q66K66 360 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 C10orf82Q8WW14 230 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 RIPOR3Q96MK2 946 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 B3GNT4Q9C0J1 378 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 ITIH1P19827 911 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 COX18Q8N8Q8 333 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 LSM14AQ8ND56 463 aaKnown RBP17.67■□□□□ 0.42
COL5A3-201ENST00000264828 RPL10LQ96L21 214 aaKnown RBP17.67■□□□□ 0.42
COL5A3-201ENST00000264828 DHRS1Q96LJ7 313 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 LGR4Q9BXB1 951 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 MAGEE1Q9HCI5 957 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF69Q9UC07 566 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 USP2O75604 605 aaPredicted RBP17.67■□□□□ 0.42
COL5A3-201ENST00000264828 ELNP15502 786 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 ZNF823P16415 610 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 MERTKQ12866 999 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 SCARB2Q14108 478 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 C4orf46Q504U0 113 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 GJD3Q8N144 294 aa17.67■□□□□ 0.42
COL5A3-201ENST00000264828 TTC24A2A3L6 582 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms