RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 DAPK2Q9UIK4 370 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 MBD1Q9UIS9 605 aaPredicted RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 EIF3LQ9Y262 564 aaKnown RBP8.94□□□□□ -0.98
MSH4-201ENST00000263187 MYO7AQ13402 2215 aa8.94□□□□□ -0.98
MSH4-201ENST00000263187 TRIM64CA6NLI5 447 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 AREL1O15033 823 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 KDELR3O43731 214 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ABCB7O75027 752 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CYBAP13498 195 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 PRKAR2AP13861 404 aaKnown RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 ITPKAP23677 461 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CA8P35219 290 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 DGKEP52429 567 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 DSC1Q08554 894 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 PAGE2BQ5JRK9 111 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 MFSD14CQ5VZR4 134 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 DHRS4L2Q6PKH6 230 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TPGS1Q6ZTW0 290 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 NECAB2Q7Z6G3 386 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 PAPD5Q8NDF8 572 aaKnown RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 ABHD11Q8NFV4 315 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 KCNJ9Q92806 393 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 RPL3LQ92901 407 aaKnown RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 NRBF2Q96F24 287 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 FUBP3Q96I24 572 aaKnown RBP eCLIP8.93□□□□□ -0.98
MSH4-201ENST00000263187 SLC22A12Q96S37 553 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 BBS2Q9BXC9 721 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TANC1Q9C0D5 1861 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 PARVBQ9HBI1 364 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 PSME2Q9UL46 239 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 NLRC5Q86WI3 1866 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 PER2O15055 1255 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 RAD51BO15315 384 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CREG1O75629 220 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CPSF4O95639 269 aaKnown RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 CD160O95971 181 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 OTCP00480 354 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ALDH2P05091 517 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TRIM16LQ309B1 348 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CYP27C1Q4G0S4 372 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 DOK6Q6PKX4 331 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ANKS3Q6ZW76 656 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CEP68Q76N32 757 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TMCO2Q7Z6W1 182 aaPredicted RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 SLCO6A1Q86UG4 719 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ALDH16A1Q8IZ83 802 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ZNF548Q8NEK5 533 aaPredicted RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 MCOLN3Q8TDD5 553 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ADAMTS16Q8TE57 1224 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ZFP90Q8TF47 636 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 BCL7CQ8WUZ0 217 aaPredicted RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 ITFG2Q969R8 447 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 NODALQ96S42 347 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 UGT2B28Q9BY64 529 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ATG10Q9H0Y0 220 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 LRTM1Q9HBL6 345 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 OLA1Q9NTK5 396 aaKnown RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 CRLS1Q9UJA2 301 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ABCG2Q9UNQ0 655 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 SH3GLB1Q9Y371 365 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 PATJQ8NI35 1801 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TYW5A2RUC4 315 aaKnown RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 PFDN6O15212 129 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CLPXO76031 633 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 FKBP9O95302 570 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 IGLV3-27P01718 113 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 SLC10A3P09131 477 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 BCKDHAP12694 445 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 HOXB8P17481 243 aaPredicted RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 CR2P20023 1033 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 DCTP40126 519 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 NCS1P62166 190 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 RELAQ04206 551 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TSTA3Q13630 321 aaPredicted RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 CARD16Q5EG05 197 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 COQ5Q5HYK3 327 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ZCCHC8Q6NZY4 707 aaKnown RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 FKBP9P1Q75LS8 142 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TTC30BQ8N4P2 665 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 LMNTD1Q8N9Z9 388 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 KLHL23Q8NBE8 558 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ZNF420Q8TAQ5 688 aaPredicted RBP8.93□□□□□ -0.98
MSH4-201ENST00000263187 ELMO1Q92556 727 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 FOXJ1Q92949 421 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 TPD52L3Q96J77 140 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 APOLD1Q96LR9 279 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 ARL15Q9NXU5 204 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 CDH7Q9ULB5 785 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 DHRS7Q9Y394 339 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 Q9Y3F1 56 aa8.93□□□□□ -0.98
MSH4-201ENST00000263187 SLC1A7O00341 560 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 ADAMTS4O75173 837 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 SEC14L2O76054 403 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 STC2O76061 302 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 PDYNP01213 254 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 F11P03951 625 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 NTRK1P04629 796 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 PTGER3P43115 390 aa8.92□□□□□ -0.98
MSH4-201ENST00000263187 GNPDA1P46926 289 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms