RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 DEFB110Q30KQ9 67 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 FASTKD1Q53R41 847 aaKnown RBP11.85□□□□□ -0.51
TRAF4-202ENST00000262396 IRAK1BP1Q5VVH5 260 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 DENND5AQ6IQ26 1287 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 UNC5AQ6ZN44 842 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 RAB42Q8N4Z0 105 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 OTUD6BQ8N6M0 293 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 CCDC89Q8N998 374 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 GALNT11Q8NCW6 608 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 CFAP61Q8NHU2 1237 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 SKA2Q8WVK7 121 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-202ENST00000262396 ALG3Q92685 438 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 BAG1Q99933 345 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-202ENST00000262396 DHRS4Q9BTZ2 278 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 SLC39A10Q9ULF5 831 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-202ENST00000262396 ZNF148Q9UQR1 794 aa11.85□□□□□ -0.51
TRAF4-202ENST00000262396 PTRH2Q9Y3E5 179 aaKnown RBP11.85□□□□□ -0.51
TRAF4-202ENST00000262396 A0A0J9YY10 115 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 GRID2IPA4D2P6 1211 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 H7C0S8 307 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 AP2A1O95782 977 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 CHRM5P08912 532 aaPredicted RBP11.84□□□□□ -0.51
TRAF4-202ENST00000262396 UGT2B7P16662 529 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 DCDP81605 110 aaKnown RBP11.84□□□□□ -0.51
TRAF4-202ENST00000262396 SRSF1Q07955 248 aaKnown RBP eCLIP11.84□□□□□ -0.511e-7■■■■□ 23.8
TRAF4-202ENST00000262396 HSPA14Q0VDF9 509 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 ATP1A4Q13733 1029 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 ELOAQ14241 798 aaKnown RBP11.84□□□□□ -0.51
TRAF4-202ENST00000262396 SLC9A5Q14940 896 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 C4orf17Q53FE4 359 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 FAM69BQ5VUD6 431 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 LCN10Q6JVE6 187 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 AFTPHQ6ULP2 937 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 NAPRTQ6XQN6 538 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 CDHR3Q6ZTQ4 885 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 ZNF655Q8N720 491 aaPredicted RBP11.84□□□□□ -0.51
TRAF4-202ENST00000262396 FDCSPQ8NFU4 85 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 OR52K1Q8NGK4 314 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 DENND1AQ8TEH3 1009 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 TM9SF4Q92544 642 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 MRFAP1L1Q96HT8 127 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 AP1M1Q9BXS5 423 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 PITPNM3Q9BZ71 974 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 INTS7Q9NVH2 962 aaKnown RBP11.84□□□□□ -0.51
TRAF4-202ENST00000262396 OR6C2Q9NZP2 312 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 PLAGL1Q9UM63 463 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 SRPK3Q9UPE1 567 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 ICKQ9UPZ9 632 aa11.84□□□□□ -0.51
TRAF4-202ENST00000262396 IGLV3-16A0A075B6K0 115 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 TRBV5-4A0A0C4DH59 114 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 CCDC162PA2VCL2 907 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 OR51F1A6NGY5 319 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 ERI2A8K979 691 aaKnown RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 ZSCAN9O15535 394 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 APOA4P06727 396 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 MSL3P1P0C860 447 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 PIM1P11309 404 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 RORAP35398 523 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 FDFT1P37268 417 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 UQCRFS1P47985 274 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 CD97P48960 835 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 SSPNQ14714 243 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 KIR2DS3Q14952 304 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 INPP5JQ15735 1006 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 AARS2Q5JTZ9 985 aaKnown RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 PTRHD1Q6GMV3 140 aaKnown RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 TLDC1Q6P9B6 456 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 FAM198BQ6UWH4 519 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 RAD9BQ6WBX8 426 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 PIANPQ8IYJ0 282 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 ADGRF3Q8IZF5 1079 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 ZBTB2Q8N680 514 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 PPHLN1Q8NEY8 458 aaKnown RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 OR5K2Q8NHB8 316 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 PRR7Q8TB68 274 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 PROKR1Q8TCW9 393 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 DLG3Q92796 817 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 HDAC10Q969S8 669 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 SLC22A18Q96BI1 424 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 LACRTQ9GZZ8 138 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 SPRTNQ9H040 489 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 ILKAPQ9H0C8 392 aaPredicted RBP11.83□□□□□ -0.52
TRAF4-202ENST00000262396 CASS4Q9NQ75 786 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 PLCL2Q9UPR0 1127 aa11.83□□□□□ -0.52
TRAF4-202ENST00000262396 BSNQ9UPA5 3926 aa11.82□□□□□ -0.52
TRAF4-202ENST00000262396 GOT2P00505 430 aaKnown RBP11.82□□□□□ -0.52
TRAF4-202ENST00000262396 UQCRHP07919 91 aa11.82□□□□□ -0.52
TRAF4-202ENST00000262396 CBSLP0DN79 551 aa11.82□□□□□ -0.52
TRAF4-202ENST00000262396 ADRA1DP25100 572 aa11.82□□□□□ -0.52
TRAF4-202ENST00000262396 CBSP35520 551 aa11.82□□□□□ -0.52
TRAF4-202ENST00000262396 GDF10P55107 478 aa11.82□□□□□ -0.52
TRAF4-202ENST00000262396 DNAJC21Q5F1R6 531 aaKnown RBP11.82□□□□□ -0.52
TRAF4-202ENST00000262396 VWA5B1Q5TIE3 1220 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms