RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MMP12P39900 470 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 DGKQP52824 942 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 AP5B1Q2VPB7 878 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 ZNF284Q2VY69 593 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 C9orf64Q5T6V5 341 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 SULT1C3Q6IMI6 304 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 ZFP28Q8NHY6 868 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 PIP4K2CQ8TBX8 421 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 LZICQ8WZA0 190 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 ULK4Q96C45 1275 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 SAMD11Q96NU1 681 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 NUSAP1Q9BXS6 441 aaKnown RBP13.27□□□□□ -0.29
VMP1-201ENST00000262291 USP22Q9UPT9 525 aa13.27□□□□□ -0.29
VMP1-201ENST00000262291 TRIM38O00635 465 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ACOT8O14734 319 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 HOXC11O43248 304 aaPredicted RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 STK16O75716 305 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 WDR47O94967 919 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 IDO1P14902 403 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 SH3BGRP55822 239 aaPredicted RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 RPL38P63173 70 aaKnown RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 DCTN2Q13561 401 aaKnown RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 HENMT1Q5T8I9 393 aaKnown RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 IL23RQ5VWK5 629 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 RTL10Q7L3V2 364 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 RAVER1Q8IY67 606 aaKnown RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 RPP25Q9BUL9 199 aaKnown RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 LIN28AQ9H9Z2 209 aaKnown RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 SPAG4Q9NPE6 437 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 NDUFAF1Q9Y375 327 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PRKAB1Q9Y478 270 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 K7EPI3 171 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 SH3BGRLO75368 114 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 CLPTM1O96005 669 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 TFAP2AP05549 437 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PRR35P0CG20 571 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 EPORP19235 508 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ZFP36L2P47974 494 aaKnown RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 SOX9P48436 509 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ATP4BP51164 291 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 CHN2P52757 468 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PTCHD3Q3KNS1 767 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 KCTD21Q4G0X4 260 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 RABL3Q5HYI8 236 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 SLC2A7Q6PXP3 512 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 VITQ6UXI7 678 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 DPPA4Q7L190 304 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 CHFRQ96EP1 664 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 TMEM74Q96NL1 305 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ACTR8Q9H981 624 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PRM3Q9NNZ6 103 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 DOLKQ9UPQ8 538 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 SLC22A14Q9Y267 594 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 A0A1W2PQ67 120 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 NME4O00746 187 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 SLC22A3O75751 556 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 NFATC1O95644 943 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ANXA5P08758 320 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 EPB42P16452 691 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ZNF30P17039 623 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PSMC3P17980 439 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PDHA2P29803 388 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 BDKRB1P46663 353 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PSMD8P48556 350 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ACADVLP49748 655 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PTPN5P54829 565 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ERVK-8P63133 956 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 GK3PQ14409 553 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 PTGR1Q14914 329 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ERAP2Q6P179 960 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 AAGABQ6PD74 315 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 BLOC1S3Q6QNY0 202 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 TECPR1Q7Z6L1 1165 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ZNF557Q8N988 423 aaPredicted RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 JADE3Q92613 823 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 FAM83CQ9BQN1 747 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 SFXN1Q9H9B4 322 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 RIC8BQ9NVN3 520 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 DPP7Q9UHL4 492 aa13.26□□□□□ -0.29
VMP1-201ENST00000262291 ZNF490Q9ULM2 529 aaPredicted RBP13.26□□□□□ -0.29
VMP1-201ENST00000262291 FXYD1O00168 92 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 LSM1O15116 133 aaKnown RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 SRPRAP08240 638 aaKnown RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 FCARP24071 287 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 IL12RB1P42701 662 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 KCNK10P57789 538 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 TSTA3Q13630 321 aaPredicted RBP13.25□□□□□ -0.29
VMP1-201ENST00000262291 NFYCQ13952 458 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 NEK5Q6P3R8 708 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 TMEM220Q6QAJ8 160 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 SLC22A15Q8IZD6 547 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 LILRA2Q8N149 483 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 SMYD1Q8NB12 490 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 BTN2A2Q8WVV5 523 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 ASB11Q8WXH4 323 aa13.25□□□□□ -0.29
VMP1-201ENST00000262291 SEMA6AQ9H2E6 1030 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms