RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PLD3Q8IV08 490 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 SLC13A3Q8WWT9 602 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 MAL2Q969L2 176 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 NECTIN4Q96NY8 510 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ZNF347Q96SE7 839 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 NACA2Q9H009 215 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 GPRC5BQ9NZH0 403 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 IL37Q9NZH6 218 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 DLGAP4Q9Y2H0 992 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 GIT1Q9Y2X7 761 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 TSC2P49815 1807 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 SMIM35A0A1B0GVV1 85 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 PER2O15055 1255 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 WISP3O95389 354 aaPredicted RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 MATN4O95460 622 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 S100BP04271 92 aaPredicted RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 ODC1P11926 461 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 CD6P30203 668 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 CLK1P49759 484 aaKnown RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 NKX3-2P78367 333 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ARHGEF7Q14155 803 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 SKIV2LQ15477 1246 aaKnown RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 GNASQ5JWF2 1037 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ATG16L2Q8NAA4 619 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 OR56A4Q8NGH8 313 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 KCNC2Q96PR1 638 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ATAD3AQ9NVI7 634 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 ENPP5Q9UJA9 477 aa12.73□□□□□ -0.37
SNX1-201ENST00000261889 EIF3LQ9Y262 564 aaKnown RBP12.73□□□□□ -0.37
SNX1-201ENST00000261889 PNMA8CA0A1B0GUJ8 204 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 TSPAN12O95859 305 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 FGF4P08620 206 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 ENO2P09104 434 aaPredicted RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 UROSP10746 265 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 GGT1P19440 569 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 IGFBP5P24593 272 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 TAF10Q12962 218 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 Q96MT0 163 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 ADAM2Q99965 735 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 POLR1EQ9GZS1 481 aaKnown RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 HMG20AQ9NP66 347 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 ELOVL2Q9NXB9 296 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 PKP3Q9Y446 797 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 FAM234BA2RU67 622 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 RRN3P2A6NIE6 340 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 OR7A17O14581 309 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 TFECO14948 347 aaPredicted RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 AREL1O15033 823 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 FGF10O15520 208 aaPredicted RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 CPSF4O95639 269 aaKnown RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 CHRNA1P02708 482 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 RPS17P08708 135 aaKnown RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 CD36P16671 472 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 IDH2P48735 452 aaKnown RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 MSANTD2Q6P1R3 559 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 ZNF551Q7Z340 670 aaPredicted RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 P2RY8Q86VZ1 359 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 DCP2Q8IU60 420 aaKnown RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 ALDH16A1Q8IZ83 802 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 C7orf57Q8NEG2 295 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 CD200R1Q8TD46 325 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 OSBPL10Q9BXB5 764 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 DPY30Q9C005 99 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 ABHD16BQ9H3Z7 469 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 SIRT5Q9NXA8 310 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 MARCH2Q9P0N8 246 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 K7ERQ8 282 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 UGT2B4P06133 528 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 SERPINF2P08697 491 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 NUDT7P0C024 238 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 GSTM2P28161 218 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 AIF1P55008 147 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 IL2P60568 153 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 DAB2P98082 770 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 LRRC8DQ7L1W4 858 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 CCDC103Q8IW40 242 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 KNL1Q8NG31 2342 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 RHBDF1Q96CC6 855 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 FAM120BQ96EK7 910 aaKnown RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 SERPINB11Q96P15 392 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 CIPCQ9C0C6 399 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 PDP1Q9P0J1 537 aaPredicted RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 TMEFF2Q9UIK5 374 aaPredicted RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 INTS6Q9UL03 887 aaKnown RBP12.72□□□□□ -0.37
SNX1-201ENST00000261889 PCDHB9Q9Y5E1 797 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 PCDHGA3Q9Y5H0 932 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
SNX1-201ENST00000261889 ELOVL7A1L3X0 281 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 TRIM64A6NGJ6 449 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 SOBPA7XYQ1 873 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 HTR1EP28566 365 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 GRK5P34947 590 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 EEFSECP57772 596 aaKnown RBP12.71□□□□□ -0.37
SNX1-201ENST00000261889 COPZ1P61923 177 aa12.71□□□□□ -0.37
SNX1-201ENST00000261889 RACK1P63244 317 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms