RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZNF69Q9UC07 566 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 SPATA31C2B4DYI2 1134 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 PRAMEF12O95522 483 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 PAX3P23760 479 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 INHBEP58166 350 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 AP1S1P61966 158 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 HEPACAMQ14CZ8 416 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 ZACNQ401N2 412 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 ARL13AQ5H913 290 aaPredicted RBP14.05□□□□□ -0.16
CUX2-201ENST00000261726 SLC9A4Q6AI14 798 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 FAM156AQ8NDB6 213 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 SUN5Q8TC36 379 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 TRMT61BQ9BVS5 477 aaKnown RBP14.05□□□□□ -0.16
CUX2-201ENST00000261726 ZNF471Q9BX82 626 aaPredicted RBP14.05□□□□□ -0.16
CUX2-201ENST00000261726 GDAP2Q9NXN4 497 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 PCDHAC2Q9Y5I4 1007 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 RGPD2P0DJD1 1756 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 ELOA3DA6NLF2 546 aaPredicted RBP14.05□□□□□ -0.16
CUX2-201ENST00000261726 MT-CYBP00156 380 aaPredicted RBP14.05□□□□□ -0.16
CUX2-201ENST00000261726 SLC1A5Q15758 541 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 ELOA3BQ3SY89 546 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 LSM14AQ8ND56 463 aaKnown RBP14.05□□□□□ -0.16
CUX2-201ENST00000261726 ELOA3Q8NG57 546 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 NXPE2Q96DL1 559 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 DPYSL5Q9BPU6 564 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 CLPXO76031 633 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 S100A10P60903 97 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 PGAM4Q8N0Y7 254 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 DENND6BQ8NEG7 585 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
CUX2-201ENST00000261726 TMEM168Q9H0V1 697 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 PCDHGA10Q9Y5H3 936 aa14.05□□□□□ -0.16
CUX2-201ENST00000261726 LOC100509620A0A075B734 347 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 RPLP0P05388 317 aaKnown RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 ALPPL2P10696 532 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 GBE1Q04446 702 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 UBXN2BQ14CS0 331 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 IFI44LQ53G44 452 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TREML2Q5T2D2 321 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 SLC51AQ86UW1 340 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 FBXO9Q9UK97 447 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 NFAT5O94916 1531 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 INSIG1O15503 277 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TBX1O43435 398 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 CCR3P51677 355 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MTPNP58546 118 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 LRRC55Q6ZSA7 311 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MREGQ8N565 214 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 CCDC28BQ9BUN5 200 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MUC13Q9H3R2 512 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MED11Q9P086 117 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TNS2Q63HR2 1409 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 METTL21EPA6NDL7 271 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 ARL5CA6NH57 179 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MMP3P08254 477 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 CAP1Q01518 475 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TMEM214Q6NUQ4 689 aaKnown RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 CPNE9Q8IYJ1 553 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 ZNF611Q8N823 705 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 PROKR2Q8NFJ6 384 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 AZIN2Q96A70 460 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 NSMCE3Q96MG7 304 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 RC3H2Q9HBD1 1191 aaKnown RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 ZNF446Q9NWS9 450 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 PDE10AQ9Y233 779 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TCAF1Q9Y4C2 921 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 PEX16Q9Y5Y5 336 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 KANTRA0A1W2PQU2 76 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 FCER2P06734 321 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TPSB2P20231 275 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 EIF1AXP47813 144 aaKnown RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 RPP38P78345 283 aaKnown RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 TPSAB1Q15661 275 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 EIPR1Q53HC9 387 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 ASB18Q6ZVZ8 466 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 PYROXD2Q8N2H3 581 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 HDDC3Q8N4P3 179 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 ZNF781Q8N8C0 355 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 INO80EQ8NBZ0 244 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 CEP76Q8TAP6 659 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 SUN3Q8TAQ9 357 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TIMMDC1Q9NPL8 285 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 GTF2IRD1Q9UHL9 959 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 ZNF142P52746 1687 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 KLRG2A4D1S0 409 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 ZNF16P17020 682 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 ZNF8P17098 575 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 LHCGRP22888 699 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 CLCNKBP51801 687 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 LCP2Q13094 533 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 SLITRK4Q8IW52 837 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 DNAJC19Q96DA6 116 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 SMURF2Q9HAU4 748 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 TRPV4Q9HBA0 871 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 RPP14O95059 124 aaKnown RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 TAS2R50P59544 299 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms