RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 OR2L2Q8NH16 312 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 RCN3Q96D15 328 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 MMADHCQ9H3L0 296 aaPredicted RBP21.8■■□□□ 1.08
SIX3-201ENST00000260653 WDR26Q9H7D7 661 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 BAIAP2L1Q9UHR4 511 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 SLC22A14Q9Y267 594 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 CHUKO15111 745 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 RNGTTO60942 597 aaKnown RBP21.8■■□□□ 1.08
SIX3-201ENST00000260653 ATP6V1G2O95670 118 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 ITPKAP23677 461 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 MAT2AP31153 395 aaKnown RBP21.8■■□□□ 1.08
SIX3-201ENST00000260653 NUDT2P50583 147 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 SGCGQ13326 291 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 ABRAXAS2Q15018 415 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 KIF19Q2TAC6 998 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 TTC31Q49AM3 519 aaPredicted RBP21.8■■□□□ 1.08
SIX3-201ENST00000260653 SLC44A4Q53GD3 710 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 FBXL8Q96CD0 374 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 MRGPRX1Q96LB2 322 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 FOPNLQ96NB1 174 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 TEX101Q9BY14 249 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3DA0A087WVF3 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3IA0A087WXS9 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3EA0A087X179 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3KA0A087X1G2 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 C17orf113A0A1B0GUU1 675 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3FA6NER0 549 aaPredicted RBP21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3LB9A6J9 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3HP0C7X1 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 EBLN1P0CF75 366 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 CCINQ13939 588 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3GQ6DHY5 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3CQ6IPX1 549 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 KIAA1161Q6NSJ0 714 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 FAM83HQ6ZRV2 1179 aaPredicted RBP21.79■■□□□ 1.08
SIX3-201ENST00000260653 Q6ZSR9 355 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TBC1D3Q8IZP1 549 aaPredicted RBP21.79■■□□□ 1.08
SIX3-201ENST00000260653 SLC17A9Q9BYT1 436 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 DENND2DQ9H6A0 471 aaPredicted RBP21.79■■□□□ 1.08
SIX3-201ENST00000260653 MRGBPQ9NV56 204 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 MGAT4DA6NG13 374 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TRIM23P36406 574 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 ATP4BP51164 291 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 NME5P56597 212 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 STX1BP61266 288 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 OGFOD2Q6N063 350 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TTC23LQ6PF05 361 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 PAOXQ6QHF9 649 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 ULK2Q8IYT8 1036 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 ARHGAP24Q8N264 748 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 HM13Q8TCT9 377 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 FAM3CQ92520 227 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 ACTR8Q9H981 624 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 TM7SF3Q9NS93 570 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 SLC23A2Q9UGH3 650 aa21.79■■□□□ 1.08
SIX3-201ENST00000260653 DIO3P55073 304 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 PFN3P60673 137 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 PPP2CBP62714 309 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 PPP2CAP67775 309 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 RIPK1Q13546 671 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 DEFB107AQ8IZN7 70 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 CCT7Q99832 543 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 FZD3Q9NPG1 666 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 PFDN4Q9NQP4 134 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 FARSBQ9NSD9 589 aaKnown RBP21.78■■□□□ 1.08
SIX3-201ENST00000260653 STOX2Q9P2F5 926 aaPredicted RBP21.78■■□□□ 1.08
SIX3-201ENST00000260653 KLQ9UEF7 1012 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 TRPS1Q9UHF7 1281 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 GPX3P22352 226 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 KIAA1324Q6UXG2 1013 aaKnown RBP21.78■■□□□ 1.08
SIX3-201ENST00000260653 HORMAD1Q86X24 394 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 SCUBE1Q8IWY4 988 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 SPDYE1Q8NFV5 336 aaPredicted RBP21.78■■□□□ 1.08
SIX3-201ENST00000260653 PKP4Q99569 1192 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 RIC8BQ9NVN3 520 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 SCML1Q9UN30 329 aa21.78■■□□□ 1.08
SIX3-201ENST00000260653 A0A088AWK7 358 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 C1orf105O95561 183 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 SLC16A8O95907 504 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 NDUFV2P19404 249 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 LRRTM4Q86VH4 590 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 SFRP1Q8N474 314 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 CCDC138Q96M89 665 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 MYOCQ99972 504 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 C1orf50Q9BV19 199 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 DNAJC11Q9NVH1 559 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 NDRG2Q9UN36 371 aaKnown RBP21.77■■□□□ 1.08
SIX3-201ENST00000260653 CLDN9O95484 217 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 HNRNPH1P31943 449 aaKnown RBP21.77■■□□□ 1.08
SIX3-201ENST00000260653 MAPK9P45984 424 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 C6orf136Q5SQH8 315 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 AMZ2Q86W34 360 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 SLC45A3Q96JT2 553 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 NPAS2Q99743 824 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 INTS7Q9NVH2 962 aaKnown RBP21.77■■□□□ 1.08
SIX3-201ENST00000260653 ZNHIT2Q9UHR6 403 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 FZD4Q9ULV1 537 aa21.77■■□□□ 1.08
SIX3-201ENST00000260653 GLULP15104 373 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 IMPA1P29218 277 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 IGFALSP35858 605 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms