RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 BIRC7Q96CA5 298 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PRR11Q96HE9 360 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 FUBP3Q96I24 572 aaKnown RBP eCLIP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PKP2Q99959 881 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 KCTD14Q9BQ13 255 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 TCEAL7Q9BRU2 100 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CRB3Q9BUF7 120 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 IFT27Q9BW83 186 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 C1QTNF1Q9BXJ1 281 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ARMT1Q9H993 441 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 EQTNQ9NQ60 294 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 GPRC5CQ9NQ84 441 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SERINC1Q9NRX5 453 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 MYEF2Q9P2K5 600 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 DCTN4Q9UJW0 460 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CLIC4Q9Y696 253 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PFASO15067 1338 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 XDHP47989 1333 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 STK36Q9NRP7 1315 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 DNASE2O00115 360 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 MEIS1O00470 390 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF263O14978 683 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 KCNQ2O43526 872 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 TGM5O43548 720 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CREG1O75629 220 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 C9P02748 559 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CHRNGP07510 517 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 H2AFB2P0C5Z0 115 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 TCF4P15884 667 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SPI1P17947 270 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CYP2B6P20813 491 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 MAGP20916 626 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PSMA5P28066 241 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 DSG3P32926 999 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CCR5P51681 352 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 WDR4P57081 412 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 NUTF2P61970 127 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 UAP1L1Q3KQV9 507 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF528Q3MIS6 628 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 RNF212Q495C1 297 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 GPR158Q5T848 1215 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 BSPRYQ5W0U4 402 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 VHLLQ6RSH7 139 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF551Q7Z340 670 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 TRIM69Q86WT6 500 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CMIPQ8IY22 773 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ANKRD52Q8NB46 1076 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 CMASQ8NFW8 434 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 OR5T1Q8NG75 326 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 OR10T2Q8NGX3 314 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 BPIFB1Q8TDL5 484 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PABPC5Q96DU9 382 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 SPACA9Q96E40 222 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 TPD52L3Q96J77 140 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF385AQ96PM9 386 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PHOX2BQ99453 314 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 MAPKAP1Q9BPZ7 522 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF559Q9BR84 538 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 MTG1Q9BT17 334 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 GAREM1Q9H706 876 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 FBRSL1Q9HCM7 1045 aaKnown RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 FBXO6Q9NRD1 293 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-201ENST00000258733 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF639Q9UID6 485 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 PCDHA13Q9Y5I0 950 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 TAF1P21675 1872 aa7.61□□□□□ -1.19
GPNMB-201ENST00000258733 HRO43593 1189 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 MLYCDO95822 493 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 OR52Z1P0C646 297 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 CPN2P22792 545 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 LTKP29376 864 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 ANXA11P50995 505 aaKnown RBP7.6□□□□□ -1.19
GPNMB-201ENST00000258733 XKP51811 444 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 SUCLG1P53597 346 aaKnown RBP7.6□□□□□ -1.19
GPNMB-201ENST00000258733 SOX8P57073 446 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 FGL1Q08830 312 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 BFSP2Q13515 415 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 NAE1Q13564 534 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 SLC18A3Q16572 532 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 IRAK1BP1Q5VVH5 260 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 YOD1Q5VVQ6 348 aaPredicted RBP7.6□□□□□ -1.19
GPNMB-201ENST00000258733 PRR5LQ6MZQ0 368 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 TIPARPQ7Z3E1 657 aaKnown RBP7.6□□□□□ -1.19
GPNMB-201ENST00000258733 ZFPM1Q8IX07 1006 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 LGI2Q8N0V4 545 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 SCML4Q8N228 414 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 ARRDC1Q8N5I2 433 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 ZNF454Q8N9F8 522 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 KBTBD8Q8NFY9 601 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 RHPN1Q8TCX5 695 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 OTUB2Q96DC9 234 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 RHOVQ96L33 236 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 HSFY1Q96LI6 401 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 PPP3R2Q96LZ3 170 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 NT5C1BQ96P26 610 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 CDCA3Q99618 268 aaPredicted RBP7.6□□□□□ -1.19
GPNMB-201ENST00000258733 TRIM56Q9BRZ2 755 aaKnown RBP7.6□□□□□ -1.19
GPNMB-201ENST00000258733 ANO3Q9BYT9 981 aa7.6□□□□□ -1.19
GPNMB-201ENST00000258733 C1orf21Q9H246 121 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms