RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 UGT3A2Q3SY77 523 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 EIF3MQ7L2H7 374 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 TLK2Q86UE8 772 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 RIOX2Q8IUF8 465 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 AGBL3Q8NEM8 1001 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 MYLPFQ96A32 169 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 EFHD2Q96C19 240 aaPredicted RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 SMARCD1Q96GM5 515 aa12.1□□□□□ -0.47
USP30-201ENST00000257548 CINPQ9BW66 212 aaPredicted RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 MRPS7Q9Y2R9 242 aaKnown RBP12.1□□□□□ -0.47
USP30-201ENST00000257548 GNG14A0A1W2PPG7 69 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 FAM155AB1AL88 458 aaPredicted RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 C22orf31O95567 290 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 IRF1P10914 325 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 WEE1P30291 646 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SSTR4P31391 388 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SLC26A2P50443 739 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 FAM187BQ17R55 369 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 CCDC58Q4VC31 144 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 RFPL4BQ6ZWI9 263 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 AMIGO1Q86WK6 493 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 THEM5Q8N1Q8 247 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 MRGPRX2Q96LB1 330 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SMIM14Q96QK8 99 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 TRIM45Q9H8W5 580 aaPredicted RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 ZNF224Q9NZL3 707 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 MAT2BQ9NZL9 334 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 PIM2Q9P1W9 311 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 N6AMT1Q9Y5N5 214 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 NFKBIEO00221 500 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 JRKO75564 520 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 GJB3O75712 270 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 TBX18O95935 607 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SCNN1GP51170 649 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 HNRNPFP52597 415 aaKnown RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 NFE2L1Q14494 772 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SMUG1Q53HV7 270 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 XAF1Q6GPH4 301 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 PLPPR4Q7Z2D5 763 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 DCP2Q8IU60 420 aaKnown RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 PYCR2Q96C36 320 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 ASIC4Q96FT7 647 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 CAMKK2Q96RR4 588 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 TMEM245Q9H330 911 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 MUC13Q9H3R2 512 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SMOC2Q9H3U7 446 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 TUBB1Q9H4B7 451 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 CPNE5Q9HCH3 593 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 ZNF222Q9UK12 451 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 PEX16Q9Y5Y5 336 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 I3L521 148 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 EIF3FO00303 357 aaPredicted RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 OR1I1O60431 355 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 CRYZL1O95825 349 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 PGRP06401 933 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 CD1DP15813 335 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SPNP16150 400 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 CTPS1P17812 591 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 XPAP23025 273 aaPredicted RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 HTR1EP28566 365 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 OAZ1P54368 228 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 GRSF1Q12849 480 aaKnown RBP eCLIP12.09□□□□□ -0.47
USP30-201ENST00000257548 ZSWIM7Q19AV6 140 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SIRPB2Q5JXA9 342 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 DDI2Q5TDH0 399 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 HOMEZQ8IX15 550 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 PEX5LQ8IYB4 626 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 OR8H3Q8N146 312 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 PIK3R3Q92569 461 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 POLR1EQ9GZS1 481 aaKnown RBP12.09□□□□□ -0.47
USP30-201ENST00000257548 CRISPLD1Q9H336 500 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 GPR83Q9NYM4 423 aa12.09□□□□□ -0.47
USP30-201ENST00000257548 GPR39O43194 453 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 TLL1O43897 1013 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 S1PR4O95977 384 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 THP07101 528 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 HRH2P25021 359 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 MC4RP32245 332 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 HNF4AP41235 474 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 GNPDA1P46926 289 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 FKBP1AP62942 108 aaKnown RBP12.08□□□□□ -0.48
USP30-201ENST00000257548 RPP38P78345 283 aaKnown RBP12.08□□□□□ -0.48
USP30-201ENST00000257548 SPIBQ01892 262 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
USP30-201ENST00000257548 SYT12Q8IV01 421 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 LYSMD2Q8IV50 215 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 CLDN19Q8N6F1 224 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 OR4F6Q8NGB9 312 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 VANGL1Q8TAA9 524 aaPredicted RBP12.08□□□□□ -0.48
USP30-201ENST00000257548 ADAMTS16Q8TE57 1224 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 C1GALT1C1Q96EU7 318 aa12.08□□□□□ -0.48
USP30-201ENST00000257548 SEPT5Q99719 369 aaPredicted RBP12.08□□□□□ -0.48
USP30-201ENST00000257548 DPH2Q9BQC3 489 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms