RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ARHGEF33A8MVX0 844 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 K7EPI3 171 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 STK16O75716 305 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 CAPN1P07384 714 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 GSTM1P09488 218 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 ANPEPP15144 967 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 ACADSP16219 412 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 RPS21P63220 83 aaKnown RBP18.44■□□□□ 0.54
TRIM47-201ENST00000254816 GSTM4Q03013 218 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 TRAF3Q13114 568 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 SP140Q13342 867 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 CCINQ13939 588 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 NFE2L1Q14494 772 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 KIAA1324Q6UXG2 1013 aaKnown RBP18.44■□□□□ 0.54
TRIM47-201ENST00000254816 KBTBD2Q8IY47 623 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 DEFB107AQ8IZN7 70 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 CPSF7Q8N684 471 aaKnown RBP18.44■□□□□ 0.54
TRIM47-201ENST00000254816 TP53I13Q8NBR0 393 aaPredicted RBP18.44■□□□□ 0.54
TRIM47-201ENST00000254816 FLCNQ8NFG4 579 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 MRGPRX1Q96LB2 322 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 PABPN1LA6NDY0 278 aaKnown RBP18.44■□□□□ 0.54
TRIM47-201ENST00000254816 SLC16A5O15375 505 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 VEGFDO43915 354 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 PKNOX1P55347 436 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 GRB7Q14451 532 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 SMAD2Q15796 467 aaKnown RBP18.44■□□□□ 0.54
TRIM47-201ENST00000254816 ANO7Q6IWH7 933 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 CHSY3Q70JA7 882 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 SLC22A15Q8IZD6 547 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 MCOLN3Q8TDD5 553 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 FAM131CQ96AQ9 280 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 SLC17A9Q9BYT1 436 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 ATG10Q9H0Y0 220 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 TM7SF3Q9NS93 570 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 POLG2Q9UHN1 485 aa18.44■□□□□ 0.54
TRIM47-201ENST00000254816 H3BM21 787 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 UBDO15205 165 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 PSIP1O75475 530 aaKnown RBP18.43■□□□□ 0.54
TRIM47-201ENST00000254816 BAG2O95816 211 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 NDUFV2P19404 249 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 PPP2CBP62714 309 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 PPP2CAP67775 309 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 CDKL1Q00532 357 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 SGCGQ13326 291 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 FAM83HQ6ZRV2 1179 aaPredicted RBP18.43■□□□□ 0.54
TRIM47-201ENST00000254816 MILR1Q7Z6M3 343 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 C11orf96Q7Z7L8 435 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 RASGRP3Q8IV61 690 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 METTL6Q8TCB7 284 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 HLA-CQ95604 372 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 TUBGCP3Q96CW5 907 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 HBEGFQ99075 208 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 FBRSQ9HAH7 460 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 BATF3Q9NR55 127 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 ALDOCP09972 364 aaKnown RBP18.43■□□□□ 0.54
TRIM47-201ENST00000254816 PIK3CGP48736 1102 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 HTR6P50406 440 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 AGERQ15109 404 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 PTCHD3Q3KNS1 767 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 TMEM259Q4ZIN3 620 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 PYDC1Q8WXC3 89 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 C1QTNF2Q9BXJ5 285 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 SLC23A2Q9UGH3 650 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 ANGPTL2Q9UKU9 493 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 GPR34Q9UPC5 381 aa18.43■□□□□ 0.54
TRIM47-201ENST00000254816 TCRBV21S2A2A0A5A6 115 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 WDR47O94967 919 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 OTCP00480 354 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 ACADMP11310 421 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 EPB42P16452 691 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 MAP4P27816 1152 aaKnown RBP18.42■□□□□ 0.54
TRIM47-201ENST00000254816 BLMHQ13867 455 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 Q6ZS52 159 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 SNX32Q86XE0 403 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 HIPK4Q8NE63 616 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 NUSAP1Q9BXS6 441 aaKnown RBP18.42■□□□□ 0.54
TRIM47-201ENST00000254816 TEX101Q9BY14 249 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 SLC32A1Q9H598 525 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 WDR26Q9H7D7 661 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 GEMIN8Q9NWZ8 242 aaKnown RBP18.42■□□□□ 0.54
TRIM47-201ENST00000254816 RNF11Q9Y3C5 154 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 ST14Q9Y5Y6 855 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 LOC730098B7Z3J9 87 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 LIN7AO14910 233 aaPredicted RBP18.42■□□□□ 0.54
TRIM47-201ENST00000254816 SLC31A1O15431 190 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 SRFP11831 508 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 EPORP19235 508 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 ITPKAP23677 461 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 GGT5P36269 586 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 AP2B1P63010 937 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 TDGQ13569 410 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 CDKL4Q5MAI5 379 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 EOGTQ5NDL2 527 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 KIAA1161Q6NSJ0 714 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 HPS6Q86YV9 775 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 OR2T11Q8NH01 316 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 OR2L2Q8NH16 312 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 HMGCLL1Q8TB92 370 aa18.42■□□□□ 0.54
TRIM47-201ENST00000254816 ZNF514Q96K75 400 aaPredicted RBP18.42■□□□□ 0.54
TRIM47-201ENST00000254816 LINC00615Q96LM1 132 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms