RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CRISP3P54108 245 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 CHRNA6Q15825 494 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 SPIN4Q56A73 249 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 SLC25A24Q6NUK1 477 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 CBR4Q8N4T8 237 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 COX18Q8N8Q8 333 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 ESAMQ96AP7 390 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 DENND2DQ9H6A0 471 aaPredicted RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A7Q9HAW7 530 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A10Q9HAW8 530 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 UGT1A8Q9HAW9 530 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 VPS29Q9UBQ0 182 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 OR51F1A6NGY5 319 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 NADKO95544 446 aaPredicted RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 PAX7P23759 505 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 TMEM44Q2T9K0 475 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 ZNF776Q68DI1 518 aaPredicted RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 NRSN1Q8IZ57 195 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 FCRL4Q96PJ5 515 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 LRRC3Q9BY71 257 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 RASSF1Q9NS23 344 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 IKZF2Q9UKS7 526 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 TCRBV7S3A2A0A539 114 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 PAPSS2O95340 614 aaPredicted RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 ALPIP09923 528 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 TCF4P15884 667 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 IL12BP29460 328 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 MPIP34949 423 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 LRRC32Q14392 662 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 LRRC73Q5JTD7 316 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 PRAMEF14Q5SWL7 426 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 PRAMEF13Q5VWM6 474 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 MMAAQ8IVH4 418 aaKnown RBP18.61■□□□□ 0.57
PTPRE-201ENST00000254667 C1orf74Q96LT6 269 aa18.61■□□□□ 0.57
PTPRE-201ENST00000254667 RAP2AP10114 183 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 PSMA1P25786 263 aaKnown RBP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 EEFSECP57772 596 aaKnown RBP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 OGDHQ02218 1023 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 SLC13A2Q13183 592 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 PLEKHO2Q8TD55 490 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 OTUB2Q96DC9 234 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 TEPSINQ96N21 525 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 CDC14AQ9UNH5 594 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 A8MT66 165 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 TMEM150CB9EJG8 249 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 DNM1LO00429 736 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 PRAMEF11O60813 436 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 CDH12P55289 794 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 EOGTQ5NDL2 527 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 ZC3HC1Q86WB0 502 aaKnown RBP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 ZDHHC21Q8IVQ6 265 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 ANKHQ9HCJ1 492 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 TMEM59LQ9UK28 342 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 A0A1W2PRB8 838 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 AHCYL1O43865 530 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 NME6O75414 186 aaPredicted RBP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 FAUP35544 74 aaKnown RBP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 C2orf27AQ580R0 203 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 ENPP7Q6UWV6 458 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 ABHD13Q7L211 337 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 OXR1Q8N573 874 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 MTERF1Q99551 399 aaKnown RBP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 CADM1Q9BY67 442 aaKnown RBP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 ATXN10Q9UBB4 475 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 FGF18O76093 207 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 ACP5P13686 325 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 HOXD13P35453 343 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 GRIA1P42261 906 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 CCNIQ14094 377 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 SLBPQ14493 270 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTPRE-201ENST00000254667 MCFD2Q8NI22 146 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 CAMK1GQ96NX5 476 aa18.6■□□□□ 0.57
PTPRE-201ENST00000254667 AGR2O95994 175 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 EPOP01588 193 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 RPP38P78345 283 aaKnown RBP18.59■□□□□ 0.57
PTPRE-201ENST00000254667 LCN1P1Q5VSP4 162 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 ZNF783Q6ZMS7 281 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 PRR23BQ6ZRT6 265 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 RGMAQ96B86 450 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 GPR22Q99680 433 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 CLDND1Q9NY35 253 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 ZIM2Q9NZV7 527 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 MAN2B2Q9Y2E5 1009 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 FAM92AA1XBS5 289 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 TIE1P35590 1138 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 C22orf39Q6P5X5 142 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 SHDQ96IW2 340 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 DNAJB9Q9UBS3 223 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 C9JVG2 144 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 ATP5A1P25705 553 aaKnown RBP18.59■□□□□ 0.57
PTPRE-201ENST00000254667 IL12AP29459 219 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 Q6ZVU0 165 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 ATCAYQ86WG3 371 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 C10orf82Q8WW14 230 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 SMPDL3AQ92484 453 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 CRTAC1Q9NQ79 661 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 TMED5Q9Y3A6 229 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 TEX264Q9Y6I9 313 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 AQP12BA6NM10 295 aa18.59■□□□□ 0.57
PTPRE-201ENST00000254667 KLF11O14901 512 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms