RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 OR2A12Q8NGT7 310 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 CLHC1Q8NHS4 586 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 CYB5D2Q8WUJ1 264 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 PPP3R2Q96LZ3 170 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 OSBPL11Q9BXB4 747 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 GRIP2Q9C0E4 1043 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 IGFLR1Q9H665 355 aa18.29■□□□□ 0.52
PDLIM4-201ENST00000253754 H0YJX3 145 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 MANBAO00462 879 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 RGS14O43566 566 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 ULK1O75385 1050 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 TYRP14679 529 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 GSTT1P30711 240 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 BOP1Q14137 746 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 KIAA0040Q15053 153 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 CPSF6Q16630 551 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 PPP4R4Q6NUP7 873 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 LIX1Q8N485 282 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 PYCR2Q96C36 320 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 ULK4Q96C45 1275 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 SEPHS2Q99611 448 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 CPEB1Q9BZB8 566 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 RDH14Q9HBH5 336 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 PAPOLBQ9NRJ5 636 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 FAM8A1Q9UBU6 413 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 OAZ3Q9UMX2 235 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 DLGAP1O14490 977 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 JAK1P23458 1154 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 FASP25445 335 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 CALRP27797 417 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 AKT1P31749 480 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 ZNF77Q15935 545 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 POM121L1PQ3SYA9 428 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 NHSL2Q5HYW2 709 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 ZNF648Q5T619 568 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 DNAJC14Q6Y2X3 702 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 UBE2R2Q712K3 238 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 CGREF1Q99674 301 aa18.28■□□□□ 0.52
PDLIM4-201ENST00000253754 IGLV3-16A0A075B6K0 115 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 SOBPA7XYQ1 873 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 DFNA5O60443 496 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 ANXA5P08758 320 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 AOAHP28039 575 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 WEE1P30291 646 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 TXNL4AP83876 142 aaKnown RBP18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 RAB30Q15771 203 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 FAM174BQ3ZCQ3 159 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 PYCR3Q53H96 274 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 LY6G5CQ5SRR4 150 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 SUSD1Q6UWL2 747 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 GDPD4Q6W3E5 623 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 BEND7Q8N7W2 519 aaPredicted RBP18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 TRPV3Q8NET8 790 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 IRF7Q92985 503 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 BIRC7Q96CA5 298 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 NTMT1Q9BV86 223 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 VAPAQ9P0L0 249 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 WNT6Q9Y6F9 365 aa18.27■□□□□ 0.52
PDLIM4-201ENST00000253754 C2orf16Q68DN1 1984 aa18.27■□□□□ 0.51
PDLIM4-201ENST00000253754 PLXNB3Q9ULL4 1909 aa18.27■□□□□ 0.51
PDLIM4-201ENST00000253754 AHCYL1O43865 530 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 SEC22BO75396 215 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 GPIP06744 558 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 GNAO1P09471 354 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 EBLN1P0CF75 366 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 RPL10P27635 214 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 CCT8P50990 548 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 NEK2P51955 445 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 PTPN5P54829 565 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 IMPG1Q17R60 797 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 SPATS1Q496A3 300 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 NAIF1Q69YI7 327 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 HSD11B1LQ7Z5J1 315 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 ZNF641Q96N77 438 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 ACTR8Q9H981 624 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 LRTM1Q9HBL6 345 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 TRPS1Q9UHF7 1281 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 TTC34A8MYJ7 566 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 POU2F2P09086 479 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 OR56A5P0C7T3 313 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 MSH3P20585 1137 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 NADK2Q4G0N4 442 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 SPANXN4Q5MJ08 99 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 TRIM46Q7Z4K8 759 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 DTWD1Q8N5C7 304 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 SLC13A3Q8WWT9 602 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 MRPS26Q9BYN8 205 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 ACPTQ9BZG2 426 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 CEP44Q9C0F1 390 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 LMAN2LQ9H0V9 348 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 SPHK2Q9NRA0 654 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 ANAPC2Q9UJX6 822 aa18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 EIF3LQ9Y262 564 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-201ENST00000253754 ARNTLO00327 626 aa18.25■□□□□ 0.51
PDLIM4-201ENST00000253754 SLC28A1O00337 649 aa18.25■□□□□ 0.51
PDLIM4-201ENST00000253754 LEFTY1O75610 366 aa18.25■□□□□ 0.51
PDLIM4-201ENST00000253754 PDYNP01213 254 aa18.25■□□□□ 0.51
PDLIM4-201ENST00000253754 CBSLP0DN79 551 aa18.25■□□□□ 0.51
PDLIM4-201ENST00000253754 HTR1EP28566 365 aa18.25■□□□□ 0.51
PDLIM4-201ENST00000253754 CBSP35520 551 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms