RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SOHLH2Q9NX45 425 aa22.24■■□□□ 1.15
LSM4-201ENST00000252816 SPHK1Q9NYA1 384 aa22.24■■□□□ 1.15
LSM4-201ENST00000252816 ATRXP46100 2492 aa22.24■■□□□ 1.15
LSM4-201ENST00000252816 C2orf74A8MZ97 194 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 BANF1O75531 89 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 USP1O94782 785 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 S1PR4O95977 384 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 PVRP15151 417 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 ADARP55265 1226 aaKnown RBP22.23■■□□□ 1.15
LSM4-201ENST00000252816 ABHD18Q0P651 414 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 MSS51Q4VC12 460 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 IZUMO3Q5VZ72 239 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 OTOAQ7RTW8 1153 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 DENND6AQ8IWF6 608 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 ESX1Q8N693 406 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 FAM136AQ96C01 138 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 STAMBPL1Q96FJ0 436 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 SLC12A9Q9BXP2 914 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 TWSG1Q9GZX9 223 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 KLHL25Q9H0H3 589 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 KCND1Q9NSA2 647 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 GALPQ9UBC7 116 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 CIDEBQ9UHD4 219 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 LNPEPQ9UIQ6 1025 aa22.23■■□□□ 1.15
LSM4-201ENST00000252816 PIPSLA2A3N6 862 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 ESR1P03372 595 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 CHRM5P08912 532 aaPredicted RBP22.22■■□□□ 1.15
LSM4-201ENST00000252816 STAT5AP42229 794 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 TUBB4BP68371 445 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 DR1Q01658 176 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 CTBP1Q13363 440 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 TUBB2AQ13885 445 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 GRB7Q14451 532 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 CYB5D1Q6P9G0 228 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 SPESP1Q6UW49 350 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 C6orf15Q6UXA7 325 aaPredicted RBP22.22■■□□□ 1.15
LSM4-201ENST00000252816 UNC5DQ6UXZ4 953 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 TRIM73Q86UV7 250 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 HOOK3Q86VS8 718 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 ZSCAN1Q8NBB4 408 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 FLVCR1-AS1Q8TAF5 88 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 SLC39A7Q92504 469 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 ZNF501Q96CX3 271 aaPredicted RBP22.22■■□□□ 1.15
LSM4-201ENST00000252816 TRAPPC9Q96Q05 1148 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 OR2A14Q96R47 310 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 MENTQ9BUN1 341 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 TUBB2BQ9BVA1 445 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 GPN2Q9H9Y4 310 aaPredicted RBP22.22■■□□□ 1.15
LSM4-201ENST00000252816 OR6C2Q9NZP2 312 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 IL17BQ9UHF5 180 aa22.22■■□□□ 1.15
LSM4-201ENST00000252816 KPNA5O15131 536 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 PFDN6O15212 129 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 UGT2B7P16662 529 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 PEBP1P30086 187 aaKnown RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 DHX9Q08211 1270 aaKnown RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 THOC5Q13769 683 aaKnown RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 KYNUQ16719 465 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 TAF1BQ53T94 588 aaPredicted RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 PLEKHS1Q5SXH7 462 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 TMTC4Q5T4D3 741 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 SYDE1Q6ZW31 735 aaPredicted RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 PCGF5Q86SE9 256 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 BPHLQ86WA6 291 aaPredicted RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 DCUN1D3Q8IWE4 304 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 LMNTD1Q8N9Z9 388 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 FCRL4Q96PJ5 515 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 TRIM51Q9BSJ1 452 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 FBXO6Q9NRD1 293 aaPredicted RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 C20orf96Q9NUD7 363 aaPredicted RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 INTS10Q9NVR2 710 aaKnown RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 RUVBL2Q9Y230 463 aaKnown RBP22.21■■□□□ 1.15
LSM4-201ENST00000252816 NFS1Q9Y697 457 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 FAM169AQ9Y6X4 670 aa22.21■■□□□ 1.15
LSM4-201ENST00000252816 PIEZO2Q9H5I5 2752 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 H3BMM5 538 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 CCDC188H7C350 402 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 TTI1O43156 1089 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 PRB1P04280 392 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 NTRK1P04629 796 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 PKMP14618 531 aaKnown RBP22.2■■□□□ 1.14
LSM4-201ENST00000252816 F8A1P23610 371 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 PKLRP30613 574 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 PAFAH1B1P43034 410 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 GBX1Q14549 363 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 LONRF1Q17RB8 773 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 SPNS2Q8IVW8 549 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 LINC01555Q8NAE3 123 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 LSM14AQ8ND56 463 aaKnown RBP22.2■■□□□ 1.14
LSM4-201ENST00000252816 KIAA1143Q96AT1 154 aaPredicted RBP22.2■■□□□ 1.14
LSM4-201ENST00000252816 SLC45A3Q96JT2 553 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 PWWP2AQ96N64 755 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 RUNDC3BQ96NL0 473 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 VPS9D1Q9Y2B5 631 aa22.2■■□□□ 1.14
LSM4-201ENST00000252816 RPN2P04844 631 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 PGAM1P18669 254 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 CHRM3P20309 590 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 SLC1A2P43004 574 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 RAB28P51157 221 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 CRYMQ14894 314 aa22.19■■□□□ 1.14
LSM4-201ENST00000252816 PRAMEF17Q5VTA0 474 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms