RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 VARSP26640 1264 aaKnown RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 CTNNB1P35222 781 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 HSPA13P48723 471 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 CSNK1DP48730 415 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 CDH15P55291 814 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 NADK2Q4G0N4 442 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 RBM44Q6ZP01 1051 aaKnown RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 HID1Q8IV36 788 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 CHERPQ8IWX8 916 aaKnown RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 AQP12AQ8IXF9 295 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 CYGBQ8WWM9 190 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 FIG4Q92562 907 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 IRF7Q92985 503 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 HSPBAP1Q96EW2 488 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 TSSK3Q96PN8 268 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 DPY30Q9C005 99 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 ARMC1Q9NVT9 282 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 GOLGA4Q13439 2230 aaKnown RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 SZT2Q5T011 3432 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 MANBAO00462 879 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 ANKRD28O15084 1053 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 RGS14O43566 566 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 PABPC4LP0CB38 370 aaKnown RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 EPCAMP16422 314 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 ZNF24P17028 368 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 OTUD3Q5T2D3 398 aaPredicted RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 GLYATQ6IB77 296 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 GDPD4Q6W3E5 623 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 PHACTR4Q8IZ21 702 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 LILRA3Q8N6C8 439 aaPredicted RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 CDC26Q8NHZ8 85 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 BIRC7Q96CA5 298 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 ECHDC3Q96DC8 303 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 CGREF1Q99674 301 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 CRISPLD2Q9H0B8 497 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 IKZF5Q9H5V7 419 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 LRTM1Q9HBL6 345 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 DUS2Q9NX74 493 aaKnown RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 EIF3LQ9Y262 564 aaKnown RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 SLC22A14Q9Y267 594 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 ITM2BQ9Y287 266 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 CCL27Q9Y4X3 112 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 EI24O14681 340 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 OR56A5P0C7T3 313 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 LINC00271P0C7V0 271 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 PBLDP30039 288 aaPredicted RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 IRS1P35568 1242 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 NAA20P61599 178 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 PTCHD3Q3KNS1 767 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 KCTD21Q4G0X4 260 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 LYPLAL1Q5VWZ2 237 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 RBM23Q86U06 439 aaKnown RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 ADIPOR2Q86V24 386 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 DTWD1Q8N5C7 304 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 OR10A6Q8NH74 314 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 SELENOMQ8WWX9 145 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 ELMO1Q92556 727 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 PPP3R2Q96LZ3 170 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 C11orf49Q9H6J7 331 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 AGPAT4Q9NRZ5 378 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 ANAPC2Q9UJX6 822 aa15.4■□□□□ 0.06
LRFN1-201ENST00000248668 HEMK1Q9Y5R4 338 aaPredicted RBP15.4■□□□□ 0.06
LRFN1-201ENST00000248668 MOSPD3O75425 235 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 PDYNP01213 254 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 CAPNS1P04632 268 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 EPORP19235 508 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 RFC2P35250 354 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 GNPDA1P46926 289 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 DDX39BQ13838 428 aaKnown RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 COQ5Q5HYK3 327 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 GRASPQ7Z6J2 395 aaPredicted RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 OFCC1Q8IZS5 231 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 CBARPQ8N350 705 aaPredicted RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 UHRF1Q96T88 793 aaPredicted RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 P2RY13Q9BPV8 354 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 SPHK2Q9NRA0 654 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 DLGAP4Q9Y2H0 992 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 NOTCH4Q99466 2003 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 FOXM1Q08050 763 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 PPP1R8Q12972 351 aaKnown RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 ABRQ12979 859 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 LMNTD1Q8N9Z9 388 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 OR10Q1Q8NGQ4 319 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 FBXO30Q8TB52 745 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 SLC13A3Q8WWT9 602 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 ZBTB18Q99592 522 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 OSBPL11Q9BXB4 747 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 ACPTQ9BZG2 426 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 SMOXQ9NWM0 555 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 MAGED1Q9Y5V3 778 aaPredicted RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 PABPN1LA6NDY0 278 aaKnown RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 BMP2P12643 396 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 ZNF23P17027 643 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 GRIK2Q13002 908 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 SF1Q15637 639 aaKnown RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 MAPKAPK3Q16644 382 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 CCDC92Q53HC0 331 aaPredicted RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 TMEM214Q6NUQ4 689 aaKnown RBP15.39■□□□□ 0.05
LRFN1-201ENST00000248668 FAM86B1Q8N7N1 296 aa15.39■□□□□ 0.05
LRFN1-201ENST00000248668 ANKFN1Q8N957 763 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms