RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 TMEM237Q96Q45 408 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 INSM2Q96T92 566 aaPredicted RBP18.7■□□□□ 0.58
SBDS-201ENST00000246868 LRRC61Q9BV99 259 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 GATA5Q9BWX5 397 aaPredicted RBP18.7■□□□□ 0.58
SBDS-201ENST00000246868 TMEM74BQ9NUR3 256 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 TAAR2Q9P1P5 351 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 TP53BP1Q12888 1972 aaPredicted RBP18.69■□□□□ 0.58
SBDS-201ENST00000246868 TMEM114B3SHH9 223 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 SHOX2O60902 331 aaPredicted RBP18.69■□□□□ 0.58
SBDS-201ENST00000246868 F3P13726 295 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 EEF1DP29692 281 aaKnown RBP18.69■□□□□ 0.58
SBDS-201ENST00000246868 BST1Q10588 318 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 CLCA4Q14CN2 919 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 RPE65Q16518 533 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 DUOXA1Q1HG43 343 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 ZNF678Q5SXM1 525 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 PEAR1Q5VY43 1037 aaPredicted RBP18.69■□□□□ 0.58
SBDS-201ENST00000246868 GKN2Q86XP6 184 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 PHC3Q8NDX5 983 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 OR5AR1Q8NGP9 310 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 RHBDF1Q96CC6 855 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 FBXL8Q96CD0 374 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 CHMP6Q96FZ7 201 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 FERD3LQ96RJ6 166 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 MVB12BQ9H7P6 319 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 POLG2Q9UHN1 485 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 PTBP2Q9UKA9 531 aaKnown RBP18.69■□□□□ 0.58
SBDS-201ENST00000246868 DOLKQ9UPQ8 538 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 COLEC10Q9Y6Z7 277 aa18.69■□□□□ 0.58
SBDS-201ENST00000246868 KDM1AO60341 852 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 SUPT7LO94864 414 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 MTHFD1P11586 935 aaKnown RBP18.68■□□□□ 0.58
SBDS-201ENST00000246868 NDUFS1P28331 727 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 SERPINB5P36952 375 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 CTSKP43235 329 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 ARRB1P49407 418 aaPredicted RBP18.68■□□□□ 0.58
SBDS-201ENST00000246868 C1orf61Q13536 156 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 KIF19Q2TAC6 998 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 ANKS6Q68DC2 871 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 METTL2BQ6P1Q9 378 aaKnown RBP18.68■□□□□ 0.58
SBDS-201ENST00000246868 MBOAT1Q6ZNC8 495 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 SDR16C5Q8N3Y7 309 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 RAB42Q8N4Z0 105 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 OR9A1PQ8NGU1 263 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 LMX1AQ8TE12 382 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 CNDP1Q96KN2 507 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 THAP1Q9NVV9 213 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 RAB23Q9ULC3 237 aa18.68■□□□□ 0.58
SBDS-201ENST00000246868 TDRKHQ9Y2W6 561 aaKnown RBP18.68■□□□□ 0.58
SBDS-201ENST00000246868 ARHGEF17Q96PE2 2063 aaPredicted RBP18.68■□□□□ 0.58
SBDS-201ENST00000246868 OR5K4A6NMS3 321 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 OR52A4PA6NMU1 304 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 MYO1CO00159 1063 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 NPHS1O60500 1241 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 SIX3O95343 332 aaPredicted RBP18.67■□□□□ 0.58
SBDS-201ENST00000246868 CFIP05156 583 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 SLC1A6P48664 564 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 AGTR2P50052 363 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 ABCE1P61221 599 aaKnown RBP18.67■□□□□ 0.58
SBDS-201ENST00000246868 RCN2Q14257 317 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 PCBP2Q15366 365 aaKnown RBP eCLIP18.67■□□□□ 0.58
SBDS-201ENST00000246868 FAM46DQ8NEK8 389 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 OR6Y1Q8NGX8 325 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 UBTD2Q8WUN7 234 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 CXorf40BQ96DE9 158 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 PKP4Q99569 1192 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 TRMOQ9BU70 441 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 C1QTNF3Q9BXJ4 246 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 LNPEPQ9UIQ6 1025 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 SNX11Q9Y5W9 270 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 ZNF318Q5VUA4 2279 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 GMNCA6NCL1 334 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 A6NCN8 305 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 SRRM3A6NNA2 597 aaPredicted RBP18.67■□□□□ 0.58
SBDS-201ENST00000246868 AQP9O43315 295 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 STK16O75716 305 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 SNUPNO95149 360 aaKnown RBP18.67■□□□□ 0.58
SBDS-201ENST00000246868 HSPA4LO95757 839 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 HSPA7P48741 367 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 PRKG2Q13237 762 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 DUS1LQ6P1R4 473 aaKnown RBP18.67■□□□□ 0.58
SBDS-201ENST00000246868 FAM47EQ6ZV65 393 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 TRIM48Q8IWZ4 208 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 HGH1Q9BTY7 390 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 CD244Q9BZW8 370 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 DRC3Q9H069 523 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 EML4Q9HC35 981 aaKnown RBP18.67■□□□□ 0.58
SBDS-201ENST00000246868 OPTCQ9UBM4 332 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 ANGPTL3Q9Y5C1 460 aa18.67■□□□□ 0.58
SBDS-201ENST00000246868 KIR2DS5A0A0G2JLQ3 304 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 A0A0G2JNG1 304 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 ZNF839A8K0R7 811 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 KIR2DS3K7RE56 304 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 SLC16A8O95907 504 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 CELA2BP08218 269 aaPredicted RBP18.66■□□□□ 0.58
SBDS-201ENST00000246868 RPS17P08708 135 aaKnown RBP18.66■□□□□ 0.58
SBDS-201ENST00000246868 GGT5P36269 586 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 HSD17B2P37059 387 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 KIR2DS5Q14953 304 aa18.66■□□□□ 0.58
SBDS-201ENST00000246868 CCSMST1Q4G0I0 132 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms