RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CDH7Q9ULB5 785 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 PCDHB3Q9Y5E6 796 aa21.44■■□□□ 1.02
RNF39-201ENST00000244360 TRIM43BA6NCK2 446 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 H0YAE9 185 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 MANBAO00462 879 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 STK16O75716 305 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 SLC2A4P14672 509 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 RPL38P63173 70 aaKnown RBP21.43■■□□□ 1.02
RNF39-201ENST00000244360 PWP1Q13610 501 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 TRIM43Q96BQ3 446 aaPredicted RBP21.43■■□□□ 1.02
RNF39-201ENST00000244360 CGREF1Q99674 301 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 NPLQ9BXD5 320 aaPredicted RBP21.43■■□□□ 1.02
RNF39-201ENST00000244360 BRD9Q9H8M2 597 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 TLR9Q9NR96 1032 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 PKD2L2Q9NZM6 624 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 EIF3LQ9Y262 564 aaKnown RBP21.43■■□□□ 1.02
RNF39-201ENST00000244360 ZFC3H1O60293 1989 aaKnown RBP21.43■■□□□ 1.02
RNF39-201ENST00000244360 WASH3PC4AMC7 463 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 CCL16O15467 120 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 ARHGEF15O94989 841 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 UGT2B4P06133 528 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 ANXA5P08758 320 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 NCK1P16333 377 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 AOAHP28039 575 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 SPINT3P49223 89 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 EPHA5P54756 1037 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 HABP4Q5JVS0 413 aaKnown RBP21.43■■□□□ 1.02
RNF39-201ENST00000244360 MBOAT1Q6ZNC8 495 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 PPP1R14BQ96C90 147 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 OSBPL6Q9BZF3 934 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 RPF2Q9H7B2 306 aaKnown RBP21.43■■□□□ 1.02
RNF39-201ENST00000244360 PLGRKTQ9HBL7 147 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 B4GALT6Q9UBX8 382 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 KLQ9UEF7 1012 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 TMPRSS11EQ9UL52 423 aa21.43■■□□□ 1.02
RNF39-201ENST00000244360 LOC730098B7Z3J9 87 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 FFAR3O14843 346 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 GPR42O15529 346 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 NUAK1O60285 661 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 ULK1O75385 1050 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 TULP3O75386 442 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 ACRP10323 421 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 PABPC1P11940 636 aaKnown RBP21.42■■□□□ 1.02
RNF39-201ENST00000244360 EPORP19235 508 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 DGKQP52824 942 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 OR4D2P58180 307 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 LRRC26Q2I0M4 334 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 USP51Q70EK9 711 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 KLHL23Q8NBE8 558 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 OR8J3Q8NGG0 315 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 EMILIN2Q9BXX0 1053 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 FARSBQ9NSD9 589 aaKnown RBP21.42■■□□□ 1.02
RNF39-201ENST00000244360 HCFC1R1Q9NWW0 138 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 USP22Q9UPT9 525 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 PDE10AQ9Y233 779 aa21.42■■□□□ 1.02
RNF39-201ENST00000244360 BNIP3LO60238 219 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 OR56A5P0C7T3 313 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 DDX6P26196 483 aaKnown RBP eCLIP21.41■■□□□ 1.02
RNF39-201ENST00000244360 GNPDA1P46926 289 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 CYBRD1Q53TN4 286 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 PLPP6Q8IY26 295 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 GLB1L3Q8NCI6 653 aaPredicted RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 C12orf43Q96C57 262 aaKnown RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 ZBTB18Q99592 522 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 SLC12A9Q9BXP2 914 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 LIN28AQ9H9Z2 209 aaKnown RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 ZNHIT2Q9UHR6 403 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 SLCO3A1Q9UIG8 710 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 ZNF490Q9ULM2 529 aaPredicted RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 CROCCQ5TZA2 2017 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 PFDN1O60925 122 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 CDH1P12830 882 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 HTRA4P83105 476 aaPredicted RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 ARHGEF7Q14155 803 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 EGFL6Q8IUX8 553 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 AADATQ8N5Z0 425 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 CHST14Q8NCH0 376 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 SLC13A3Q8WWT9 602 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 CLP1Q92989 425 aaKnown RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 FBXL20Q96IG2 436 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 CNDP2Q96KP4 475 aaKnown RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 NSMCE2Q96MF7 247 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 PPM1MQ96MI6 270 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 DOK1Q99704 481 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 TUBA1CQ9BQE3 449 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 SLC32A1Q9H598 525 aa21.41■■□□□ 1.02
RNF39-201ENST00000244360 FAF1Q9UNN5 650 aaPredicted RBP21.41■■□□□ 1.02
RNF39-201ENST00000244360 KIAA0355O15063 1070 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 MOSPD3O75425 235 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 SEC24DO94855 1032 aaPredicted RBP21.4■■□□□ 1.02
RNF39-201ENST00000244360 C8GP07360 202 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 DCKP27707 260 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 RPIAP49247 311 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 HMGCS1Q01581 520 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 SELPLGQ14242 412 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 DMC1Q14565 340 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 AAK1Q2M2I8 961 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 Q6ZVU0 165 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 LRRC70Q7Z2Q7 622 aa21.4■■□□□ 1.02
RNF39-201ENST00000244360 RGL4Q8IZJ4 473 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms