RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 ZNF140P52738 457 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 IL5RAQ01344 420 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FOXM1Q08050 763 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 COQ5Q5HYK3 327 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 CATSPEREQ5SY80 951 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 PXDC1Q5TGL8 231 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 DLEU7Q6UYE1 221 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 SPATA19Q7Z5L4 167 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ABI1Q8IZP0 508 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 PAPD5Q8NDF8 572 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FATE1Q969F0 183 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 SPON2Q9BUD6 331 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 BRINP2Q9C0B6 783 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 POPDC3Q9HBV1 291 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 CD320Q9NPF0 282 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 INTS10Q9NVR2 710 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 LEF1Q9UJU2 399 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 U3KQV3 271 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 GBF1Q92538 1859 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 SCN10AQ9Y5Y9 1956 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 KRT87PA6NCN2 255 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 DRGXA6NNA5 263 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 C16orf96A6NNT2 1141 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 H0Y626 953 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 E2F3O00716 465 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 DYRK3O43781 588 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 KATNA1O75449 491 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 UROSP10746 265 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 CYP4B1P13584 511 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 SPNP16150 400 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 AGXTP21549 392 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FSHRP23945 695 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 GGT5P36269 586 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 TMBIM6P55061 237 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 EMX2Q04743 252 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 LAPTM5Q13571 262 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 DSC3Q14574 896 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZNF773Q6PK81 442 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 CCBE1Q6UXH8 406 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FKBP9P1Q75LS8 142 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 GLT6D1Q7Z4J2 308 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 SPERTQ8NA61 448 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 RORBQ92753 470 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 RPL3LQ92901 407 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FBXO32Q969P5 355 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 TMBIM1Q969X1 311 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ISG20Q96AZ6 181 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 VPS35Q96QK1 796 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 RMND5AQ9H871 391 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 PDFQ9HBH1 243 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 NLE1Q9NVX2 485 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 MAT2BQ9NZL9 334 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 CD274Q9NZQ7 290 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FKBPLQ9UIM3 349 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ANKRD36A6QL64 1941 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZNF701M0R085 212 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 NDST3O95803 873 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 PRLP01236 227 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 MBL2P11226 248 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FCGR1AP12314 374 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 TYMPP19971 482 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 AZGP1P25311 298 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 HOXD9P28356 352 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 SLC6A4P31645 630 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 MAP2K4P45985 399 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR1G1P47890 313 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 PIK3CGP48736 1102 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 EEFSECP57772 596 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ERVK-8P63133 956 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 CTSL3PQ5NE16 218 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 TTC23LQ6PF05 361 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 RASAL3Q86YV0 1011 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 GRAMD2AQ8IUY3 354 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 RIMKLAQ8IXN7 391 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 FAM83FQ8NEG4 500 aaPredicted RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR13F1Q8NGS4 319 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 BPIFB1Q8TDL5 484 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 UBASH3BQ8TF42 649 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 BHMTQ93088 406 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 LINGO1Q96FE5 620 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 CCDC120Q96HB5 630 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 NSMCE2Q96MF7 247 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 DOK1Q99704 481 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 SMURF2Q9HAU4 748 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 MOV10Q9HCE1 1003 aaKnown RBP9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZC4H2Q9NQZ6 224 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 TMEM9Q9P0T7 183 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZNF639Q9UID6 485 aa9.22□□□□□ -0.93
HLA-DOA-201ENST00000229829 NDUFS2O75306 463 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 FADS2O95864 444 aaKnown RBP9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 CNPP09543 421 aaKnown RBP9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 BMP1P13497 986 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 HTR1EP28566 365 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 KRT6CP48668 564 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 HLCSP50747 726 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 ARSFP54793 590 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 TUBA1BP68363 451 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRIP4Q15650 581 aaPredicted RBP9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 NKG7Q16617 165 aa9.21□□□□□ -0.93
HLA-DOA-201ENST00000229829 SYT16Q17RD7 645 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms