RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 BARD1Q99728 777 aaKnown RBP13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 RIBC2Q9H4K1 309 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 PNMA8BQ9ULN7 279 aaPredicted RBP13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 ILVBLA1L0T0 632 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 OR7A17O14581 309 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 TBX1O43435 398 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 CASP3P42574 277 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 NR4A2P43354 598 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 GZMMP51124 257 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 DAPP51397 102 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 NKX2-5P52952 324 aaPredicted RBP13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 GRB14Q14449 540 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 UPP1Q16831 310 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 KDM4DQ6B0I6 523 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 SIDT2Q8NBJ9 832 aaKnown RBP13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 OR4F6Q8NGB9 312 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 OR10T2Q8NGX3 314 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 HASPINQ8TF76 798 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 EEF1AKMT1Q8WVE0 214 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 PYCR2Q96C36 320 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 LINGO1Q96FE5 620 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 PDLIM5Q96HC4 596 aaKnown RBP13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 PPP3R2Q96LZ3 170 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 TRIB3Q96RU7 358 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 TLR6Q9Y2C9 796 aa13.71□□□□□ -0.21
SCNN1A-201ENST00000228916 IGLV3-10A0A075B6K4 115 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 VPS26AO75436 327 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 ODC1P11926 461 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SPNP16150 400 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 EFNA1P20827 205 aaPredicted RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 IL2P60568 153 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 MAD2L1BPQ15013 274 aaPredicted RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SMN1Q16637 294 aaKnown RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 MS4A13Q5J8X5 152 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 COLEC12Q5KU26 742 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 UBE2UQ5VVX9 321 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CLIP4Q8N3C7 705 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 GLB1L3Q8NCI6 653 aaPredicted RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CD200R1Q8TD46 325 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CAPSLQ8WWF8 208 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 APOL4Q9BPW4 351 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 TP63Q9H3D4 680 aaPredicted RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 FAM105AQ9NUU6 356 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 TRMT6Q9UJA5 497 aaKnown RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 A3GALT2U3KPV4 340 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 NIPSNAP2O75323 286 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 LCKP06239 509 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 PGRP06401 933 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CYP4B1P13584 511 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 PKMP14618 531 aaKnown RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 BRCC3P46736 316 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 PSEN2P49810 448 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 GTDC1Q4AE62 458 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CARD16Q5EG05 197 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SPANXN4Q5MJ08 99 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 DNAJC14Q6Y2X3 702 aaPredicted RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 GCNT7Q6ZNI0 430 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 GOLGA7Q7Z5G4 137 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 PHACTR4Q8IZ21 702 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CHCHD4Q8N4Q1 142 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SLC38A4Q969I6 547 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 TRPV5Q9NQA5 729 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 NUDT4Q9NZJ9 180 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 GMPPBQ9Y5P6 360 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 A0A1W2PQH9 124 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 MOXD2PA6NHM9 499 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 DLGAP3O95886 979 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 IL6P05231 212 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CNPP09543 421 aaKnown RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SLC2A4P14672 509 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 PSMA3P25788 255 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SEPHS1P49903 392 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 RPL38P63173 70 aaKnown RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 TRAF3Q13114 568 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SERINC3Q13530 473 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 CEP68Q76N32 757 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SNX20Q7Z614 316 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 C1orf109Q9NX04 203 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
SCNN1A-201ENST00000228916 HAS3O00219 553 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 AREL1O15033 823 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 FAM20BO75063 409 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 RPL9P32969 192 aaKnown RBP13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 KRT20P35900 424 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 ARL1P40616 181 aaPredicted RBP13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 CDKN1CP49918 316 aaPredicted RBP13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 BEX3Q00994 111 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 SMU1Q2TAY7 513 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 CTSL3PQ5NE16 218 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 DESI1Q6ICB0 168 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 TSPYL5Q86VY4 417 aaPredicted RBP13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 ZDHHC21Q8IVQ6 265 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 C10orf111Q8N326 155 aa13.69□□□□□ -0.22
SCNN1A-201ENST00000228916 OR4K2Q8NGD2 314 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms