RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PIM1P11309 404 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 AP3S2P59780 193 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CRHR2Q13324 411 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 TNFAIP8L2Q6P589 184 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 FAM47BQ8NA70 645 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 HM13Q8TCT9 377 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 GIPC3Q8TF64 312 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 WDR12Q9GZL7 423 aaKnown RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 UPB1Q9UBR1 384 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CFAP20Q9Y6A4 193 aaKnown RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 NRP1O14786 923 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 MMP8P22894 467 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CSTF2P33240 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PCBP2Q15366 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 C6orf52Q5T4I8 152 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 SLC51AQ86UW1 340 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PLA2G15Q8NCC3 412 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 A0A0G2JLL6 359 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 SOWAHBA6NEL2 793 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 TTC34A8MYJ7 566 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 MPZL2O60487 215 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 THRBP10828 461 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 GJA1P17302 382 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PAX7P23759 505 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CDKN1CP49918 316 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 DRG2P55039 364 aaKnown RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 LCP2Q13094 533 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CCINQ13939 588 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PDGFRLQ15198 375 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PAOXQ6QHF9 649 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PRRT2Q7Z6L0 340 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 OR10A6Q8NH74 314 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 B3GNT4Q9C0J1 378 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 SMURF2Q9HAU4 748 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 APOC1P02654 83 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 DRD4P21917 467 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PTGER3P43115 390 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 HCAR3P49019 387 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 GANABQ14697 944 aaKnown RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 SLC1A5Q15758 541 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 TRABD2AQ86V40 505 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 NAXEQ8NCW5 288 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 MFSD3Q96ES6 412 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 SIPA1Q96FS4 1042 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PIWIL1Q96J94 861 aaKnown RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 INPP4AQ96PE3 977 aaPredicted RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CIB1Q99828 191 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CCDC28BQ9BUN5 200 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 DKKL1Q9UK85 242 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 FADS3Q9Y5Q0 445 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 A0A0J9YVX5 310 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PI15O43692 258 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 FOSL2P15408 326 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 EIF2S3P41091 472 aaKnown RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 ARCN1P48444 511 aaKnown RBP13.01□□□□□ -0.33
COL1A1-201ENST00000225964 CDKL1Q00532 357 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 GPR68Q15743 365 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 MBLAC2Q68D91 279 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 LBX2Q6XYB7 198 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 GKN2Q86XP6 184 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 ECHDC2Q86YB7 292 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 FUKQ8N0W3 1084 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 ZSCAN1Q8NBB4 408 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 OR4K17Q8NGC6 315 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 TNFAIP8L1Q8WVP5 186 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 HTRA1Q92743 480 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 KXD1Q9BQD3 176 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 GPR88Q9GZN0 384 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 ADAP2Q9NPF8 381 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 PCDHGC3Q9UN70 934 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 MAN2B2Q9Y2E5 1009 aa13.01□□□□□ -0.33
COL1A1-201ENST00000225964 LYPLA2O95372 231 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PGRP06401 933 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 GRM2Q14416 872 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CNKSR3Q6P9H4 555 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CCDC36Q8IYA8 594 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 SCAMP5Q8TAC9 235 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 SLC22A18Q96BI1 424 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 MUC13Q9H3R2 512 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 SCDO00767 359 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PPP1R11O60927 126 aaPredicted RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 REM1O75628 298 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PRAMEF12O95522 483 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 AP1S2P56377 157 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 ENPP2Q13822 863 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 ELOAQ14241 798 aaKnown RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 IDNKQ5T6J7 187 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 IFNL1Q8IU54 200 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 TMEM156Q8N614 296 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 FAM13CQ8NE31 585 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 ZSWIM3Q96MP5 696 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 MTERF1Q99551 399 aaKnown RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 SLC39A3Q9BRY0 314 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 RIOK2Q9BVS4 552 aaKnown RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF282Q9UDV7 671 aaPredicted RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 PFDN2Q9UHV9 154 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 FAM240BA0A1B0GVZ2 78 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms