RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 PARP8Q8N3A8 854 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 ITFG1Q8TB96 612 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 FKBP10Q96AY3 582 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 CCDC97Q96F63 343 aaPredicted RBP12.84□□□□□ -0.35
PLOD3-201ENST00000223127 CCDC138Q96M89 665 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 GPR21Q99679 349 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 MTIF3Q9H2K0 278 aaKnown RBP12.84□□□□□ -0.35
PLOD3-201ENST00000223127 ZDHHC6Q9H6R6 413 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 ATP13A3Q9H7F0 1226 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 AKIP1Q9NQ31 210 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 SACM1LQ9NTJ5 587 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 IL17CQ9P0M4 197 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 USP22Q9UPT9 525 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 MRPS23Q9Y3D9 190 aaKnown RBP12.84□□□□□ -0.35
PLOD3-201ENST00000223127 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 MYO9BQ13459 2157 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 AXIN1O15169 862 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 KDM1AO60341 852 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 RSL1D1O76021 490 aaKnown RBP12.84□□□□□ -0.35
PLOD3-201ENST00000223127 SUPT7LO94864 414 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 NR4A1P22736 598 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 HNF1BP35680 557 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 TSPAN33Q86UF1 283 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 TBC1D21Q8IYX1 336 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 MIER2Q8N344 545 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 APOL5Q9BWW9 433 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 ALG2Q9H553 416 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 ZFYVE1Q9HBF4 777 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 SLC52A3Q9NQ40 469 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 SPHK2Q9NRA0 654 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 SPATA7Q9P0W8 599 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 MED16Q9Y2X0 877 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 DNAJC15Q9Y5T4 150 aa12.84□□□□□ -0.35
PLOD3-201ENST00000223127 DYTNA2CJ06 578 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 PIP5K1BO14986 540 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 HTR1AP08908 422 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 CD1DP15813 335 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 HMGCLP35914 325 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 RAD23AP54725 363 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 FOXM1Q08050 763 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 UNC50Q53HI1 259 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 OTUD3Q5T2D3 398 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 Q6ZVU0 165 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 PTRH1Q86Y79 214 aaKnown RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 SLC22A9Q8IVM8 553 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 SIDT2Q8NBJ9 832 aaKnown RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 OSCP1Q8WVF1 389 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 L3HYPDHQ96EM0 354 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 NRBF2Q96F24 287 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 TRMOQ9BU70 441 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 TAS2R13Q9NYV9 303 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 REV3LO60673 3130 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 ASPDHA6ND91 283 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 WISP3O95389 354 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 TRBC1P01850 177 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 PABPC1P11940 636 aaKnown RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 IMPDH1P20839 514 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 GSTM2P28161 218 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 SERPINA4P29622 427 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 EEF1DP29692 281 aaKnown RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 FOXA1P55317 472 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 IFITM3Q01628 133 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 OR4D1Q15615 310 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 TMEM214Q6NUQ4 689 aaKnown RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 C22orf39Q6P5X5 142 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 DPY19L3Q6ZPD9 716 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 SPARTQ8N0X7 666 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 CYB5D2Q8WUJ1 264 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 KCTD14Q9BQ13 255 aaPredicted RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 FUNDC2Q9BWH2 189 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 TRIM54Q9BYV2 358 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 MUC13Q9H3R2 512 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 MAGEE1Q9HCI5 957 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 RWDD3Q9Y3V2 267 aa12.83□□□□□ -0.36
PLOD3-201ENST00000223127 OAS3Q9Y6K5 1087 aaKnown RBP12.83□□□□□ -0.36
PLOD3-201ENST00000223127 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 UBXN8O00124 270 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 MATN4O95460 622 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 PRAMEF1O95521 474 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 UGT2B4P06133 528 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CRHBPP24387 322 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 HTR1BP28222 390 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CA5AP35218 305 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 TTPAP49638 278 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 CDH13P55290 713 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SNRPD1P62314 119 aaKnown RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SH3BP2P78314 561 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 UBE3AQ05086 875 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 LIPEQ05469 1076 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 GPM6BQ13491 265 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SETMARQ53H47 684 aaPredicted RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 R3HCC1LQ7Z5L2 792 aaKnown RBP12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ADGRG2Q8IZP9 1017 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 TWIST2Q8WVJ9 160 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 MAGED4Q96JG8 741 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 LMLNQ96KR4 655 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 LRRC3BQ96PB8 259 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 SEPHS2Q99611 448 aa12.82□□□□□ -0.36
PLOD3-201ENST00000223127 ING2Q9H160 280 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms