RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 LCN1P1Q5VSP4 162 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 PLA2G15Q8NCC3 412 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 DENND1AQ8TEH3 1009 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 WDR60Q8WVS4 1066 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 DGAT2Q96PD7 388 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 MINDY3Q9H8M7 445 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 ABCB10Q9NRK6 738 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 DMTF1Q9Y222 760 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 HCAR3P49019 387 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 NMUR2Q9GZQ4 415 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 ALG2Q9H553 416 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 ARL8BQ9NVJ2 186 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 SNX7Q9UNH6 387 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 MED31Q9Y3C7 131 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 A0A0G2JN53 185 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 PSIP1O75475 530 aaKnown RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CCNB2O95067 398 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 ALPPP05187 535 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 TCF4P15884 667 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 FOLH1Q04609 750 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 OLFML2AQ68BL7 652 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 SLC29A4Q7RTT9 530 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 TMEM156Q8N614 296 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 FATE1Q969F0 183 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 RGMAQ96B86 450 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 ART5Q96L15 291 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CPSF4LA6NMK7 179 aaKnown RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 A8MUA0 341 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 PRKAR1AP10644 381 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 RPL5P46777 297 aaKnown RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 EIF2B2P49770 351 aaKnown RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 GRM2Q14416 872 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 LYSMD3Q7Z3D4 306 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 TMEM110Q86TL2 294 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CYP2S1Q96SQ9 504 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 PIGVQ9NUD9 493 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 FAM25EA8MYX2 175 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 MMP20O60882 483 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 POP7O75817 140 aaKnown RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CCNHP51946 323 aaPredicted RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CDH12P55289 794 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CHRNA6Q15825 494 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 SLC9B1Q4ZJI4 515 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 IFI44LQ53G44 452 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 PGAM4Q8N0Y7 254 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 POC5Q8NA72 575 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 SMPDL3AQ92484 453 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 ARHGAP9Q9BRR9 750 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 EBF3Q9H4W6 596 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 MKKSQ9NPJ1 570 aaPredicted RBP18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CRTAC1Q9NQ79 661 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 CFL2Q9Y281 166 aa18.6■□□□□ 0.57
SMPD3-201ENST00000219334 C3P01024 1663 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 A0A1W2PRB8 838 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 A8MU76 341 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 PLK4O00444 970 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ZBTB22O15209 634 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 PMM2O15305 246 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 METTL18O95568 372 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 EFNA1P20827 205 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-201ENST00000219334 BCAP31P51572 246 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 PARP8Q8N3A8 854 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 NIPA2Q8N8Q9 360 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 SMOC2Q9H3U7 446 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ZCCHC3Q9NUD5 404 aaKnown RBP18.59■□□□□ 0.57
SMPD3-201ENST00000219334 BCKDKO14874 412 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 MPZL2O60487 215 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ZBTB11O95625 1053 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-201ENST00000219334 REP15Q6BDI9 236 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 SLC9B2Q86UD5 537 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 LRRC57Q8N9N7 239 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF527Q8NB42 609 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 LPGAT1Q92604 370 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ARHGEF33A8MVX0 844 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 MTX2O75431 263 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 MTRF1O75570 445 aaKnown RBP18.59■□□□□ 0.57
SMPD3-201ENST00000219334 AP1S2P56377 157 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 PSMA8Q8TAA3 256 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 KBTBD7Q8WVZ9 684 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ELOA3DA6NLF2 546 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-201ENST00000219334 SAP18O00422 153 aaKnown RBP18.59■□□□□ 0.57
SMPD3-201ENST00000219334 PGM3O95394 542 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ELOA3BQ3SY89 546 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 FAM174BQ3ZCQ3 159 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 GPR107Q5VW38 600 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ELOA3Q8NG57 546 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 GIPC3Q8TF64 312 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 CDKN2AIPNLQ96HQ2 116 aa18.59■□□□□ 0.57
SMPD3-201ENST00000219334 WRAP73Q9P2S5 460 aaPredicted RBP18.59■□□□□ 0.57
SMPD3-201ENST00000219334 ERI3O43414 337 aaKnown RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 ATP1B2P14415 290 aaPredicted RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 HADHBP55084 474 aaKnown RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 MLLT6P55198 1093 aaPredicted RBP18.58■□□□□ 0.57
SMPD3-201ENST00000219334 SLC22A15Q8IZD6 547 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 LRRC17Q8N6Y2 441 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 CHST4Q8NCG5 386 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 OR10A6Q8NH74 314 aa18.58■□□□□ 0.57
SMPD3-201ENST00000219334 ZNF296Q8WUU4 475 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms