RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 VNN2O95498 520 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 C22orf31O95567 290 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 COL6A1P12109 1028 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 SLC15A1P46059 708 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 IL23RQ5VWK5 629 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 GALNT7Q86SF2 657 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 C11orf74Q86VG3 221 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 TNFAIP8L1Q8WVP5 186 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 FAM136AQ96C01 138 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 EFCAB11Q9BUY7 163 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 ATXN3LQ9H3M9 355 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 PHPT1Q9NRX4 125 aaPredicted RBP4.34□□□□□ -1.72
CHD9-201ENST00000219084 STUB1Q9UNE7 303 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 BTRCQ9Y297 605 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 ASB3Q9Y575 518 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 LOC100130705A0A1B0GUX0 176 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 FABP12A6NFH5 140 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 EIF3FO00303 357 aaPredicted RBP4.34□□□□□ -1.72
CHD9-201ENST00000219084 PI15O43692 258 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 LGR5O75473 907 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 SLC25A14O95258 325 aaPredicted RBP4.34□□□□□ -1.72
CHD9-201ENST00000219084 SLC2A2P11168 524 aaPredicted RBP4.34□□□□□ -1.72
CHD9-201ENST00000219084 CTPS1P17812 591 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 ATP5A1P25705 553 aaKnown RBP4.34□□□□□ -1.72
CHD9-201ENST00000219084 CMPK1P30085 196 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 SLC1A2P43004 574 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 CCR8P51685 355 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 SLC5A3P53794 718 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 GNA12Q03113 381 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 RASGEF1BQ0VAM2 473 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 IRF5Q13568 498 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 RHBDF2Q6PJF5 856 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 CMC1Q7Z7K0 106 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 LIX1Q8N485 282 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 CPA6Q8N4T0 437 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 WFIKKN2Q8TEU8 576 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 PPM1MQ96MI6 270 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 P2RX7Q99572 595 aaKnown RBP4.34□□□□□ -1.72
CHD9-201ENST00000219084 MRI1Q9BV20 369 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 MTMR10Q9NXD2 777 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 TOR4AQ9NXH8 423 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 P2RX2Q9UBL9 471 aa4.34□□□□□ -1.72
CHD9-201ENST00000219084 LRRC14BA6NHZ5 514 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 E7ESA3 106 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 GTPBP1O00178 669 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 DLGAP1O14490 977 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ACOX3O15254 700 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 PRKYO43930 277 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 BANF1O75531 89 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 RSL1D1O76021 490 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 RAB36O95755 333 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 DLDP09622 509 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 CYP4B1P13584 511 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ZNF30P17039 623 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 MAPK12P53778 367 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 CNTN2Q02246 1040 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 EMX2Q04743 252 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 CXCL9Q07325 125 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 MAP2K5Q13163 448 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 MOGSQ13724 837 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 DSG2Q14126 1118 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 DUOXA1Q1HG43 343 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 FAM174BQ3ZCQ3 159 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 VARS2Q5ST30 1063 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 CERCAMQ5T4B2 595 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 NBPF12Q5TAG4 269 aaPredicted RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 RAP1GAP2Q684P5 730 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 MSANTD2Q6P1R3 559 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 UXS1Q8NBZ7 420 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ADAM2Q99965 735 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SMOC2Q9H3U7 446 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 Q9Y3F1 56 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 OR10H1Q9Y4A9 318 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TELO2Q9Y4R8 837 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SNED1Q8TER0 1413 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SH3D21A4FU49 640 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 K7EPI3 171 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SLC16A5O15375 505 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 AP2A2O94973 939 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 PTTG1O95997 202 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 PTGS2P35354 604 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TNFSF9P41273 254 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ABL2P42684 1182 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 RGS8P57771 180 aaPredicted RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 FGL1Q08830 312 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 VGLL4Q14135 290 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 KCNA10Q16322 511 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 UGCGQ16739 394 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ZNF423Q2M1K9 1284 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 HSDL1Q3SXM5 330 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 PLEKHN1Q494U1 663 aaPredicted RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 ATG9BQ674R7 924 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TPGS2Q68CL5 300 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 DNM1P34Q6PK57 102 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 KBTBD2Q8IY47 623 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 OR56A1Q8NGH5 318 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TRPM4Q8TD43 1214 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ISOC1Q96CN7 298 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 FCRL4Q96PJ5 515 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ZNF382Q96SR6 550 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms