RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 ARMC12Q5T9G4 340 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 GALNT18Q6P9A2 607 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 FAM151BQ6UXP7 276 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 C16orf59Q7L2K0 433 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 RBM23Q86U06 439 aaKnown RBP13.02□□□□□ -0.32
SRP54-201ENST00000216774 RGL4Q8IZJ4 473 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 HS3ST5Q8IZT8 346 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 ZBTB2Q8N680 514 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 FBLIM1Q8WUP2 373 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 SGCDQ92629 289 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 MYO19Q96H55 970 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 NODALQ96S42 347 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 BCL7BQ9BQE9 202 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 TBCDQ9BTW9 1192 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 FUNDC2Q9BWH2 189 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 APOL5Q9BWW9 433 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 ZFP14Q9HCL3 533 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 FARSBQ9NSD9 589 aaKnown RBP13.02□□□□□ -0.32
SRP54-201ENST00000216774 WARS2Q9UGM6 360 aaKnown RBP13.02□□□□□ -0.32
SRP54-201ENST00000216774 ENPP5Q9UJA9 477 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 BAG5Q9UL15 447 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 MAN2B2Q9Y2E5 1009 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 COQ6Q9Y2Z9 468 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 CEP350Q5VT06 3117 aa13.02□□□□□ -0.32
SRP54-201ENST00000216774 ANKRD12Q6UB98 2062 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 A0A096LPI6 279 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 SLC1A7O00341 560 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 HS6ST1O60243 411 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 TSPAN3O60637 253 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 E2F6O75461 281 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 SLC25A14O95258 325 aaPredicted RBP13.02□□□□□ -0.33
SRP54-201ENST00000216774 PGLSO95336 258 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 PRAMEF12O95522 483 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 PORP16435 677 aaPredicted RBP13.02□□□□□ -0.33
SRP54-201ENST00000216774 ITGALP20701 1170 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 CCND3P30281 292 aaPredicted RBP13.02□□□□□ -0.33
SRP54-201ENST00000216774 NR1D2Q14995 579 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 USP39Q53GS9 565 aaKnown RBP13.02□□□□□ -0.33
SRP54-201ENST00000216774 GPRC6AQ5T6X5 926 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 GRAMD4Q6IC98 578 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 LAIR2Q6ISS4 152 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 TTC23LQ6PF05 361 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 CRTC3Q6UUV7 619 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 MACC1Q6ZN28 852 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 GCNT7Q6ZNI0 430 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 SLC16A12Q6ZSM3 486 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 ANKRD13BQ86YJ7 626 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 FAM9CQ8IZT9 166 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 CENPSQ8N2Z9 138 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 KRTCAP2Q8N6L1 136 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 PIH1D2Q8WWB5 315 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 NCLNQ969V3 563 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 CPPED1Q9BRF8 314 aaPredicted RBP13.02□□□□□ -0.33
SRP54-201ENST00000216774 TTPALQ9BTX7 342 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 BOCQ9BWV1 1114 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 KCNH6Q9H252 994 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 ERGIC3Q9Y282 383 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 PCDHGB1Q9Y5G3 927 aa13.02□□□□□ -0.33
SRP54-201ENST00000216774 TRBV5-4A0A0C4DH59 114 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 BCAS1O75363 584 aaPredicted RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 ITGAMP11215 1152 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 PCMT1P22061 227 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ACRV1P26436 265 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 GDF5P43026 501 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 TUFMP49411 452 aaKnown RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 GZMMP51124 257 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 KCNC4Q03721 635 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 RGS21Q2M5E4 152 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 DPY19L1Q2PZI1 675 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 SUSD1Q6UWL2 747 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 DNAJC14Q6Y2X3 702 aaPredicted RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 LINC00299Q6ZSB3 139 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ARL10Q8N8L6 244 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 KLHL23Q8NBE8 558 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 LKAAEAR1Q8TD35 194 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 TBC1D20Q96BZ9 403 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ULK4Q96C45 1275 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 FAM120BQ96EK7 910 aaKnown RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 CCDC97Q96F63 343 aaPredicted RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 ZNF347Q96SE7 839 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 TRIT1Q9H3H1 467 aaKnown RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 ASB8Q9H765 288 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 GKN1Q9NS71 199 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 EVLQ9UI08 416 aaPredicted RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 TMEFF2Q9UIK5 374 aaPredicted RBP13.01□□□□□ -0.33
SRP54-201ENST00000216774 UTS2RQ9UKP6 389 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 PCDHB14Q9Y5E9 798 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 C1orf232A0A0U1RR37 186 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 FUOMA2VDF0 154 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 LOC730098B7Z3J9 87 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 H0Y626 953 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 M0QX08 132 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 TRIM16O95361 564 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 SERPINA1P01009 418 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 KRT6AP02538 564 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 KRT6BP04259 564 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 ALPIP09923 528 aa13.01□□□□□ -0.33
SRP54-201ENST00000216774 BCKDHAP12694 445 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms