RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm13089A2AGW7 455 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Armc4B2RY50 1037 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm5861F6VCN9 180 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 4933402N22RikF7D1B3 190 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Btnl2O70355 454 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ptger3P30557 365 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 AhcyP50247 432 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 St14P56677 855 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Polr2iP60898 125 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ikzf1Q03267 517 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Dok6Q2MHE5 331 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Bcap31Q61335 245 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Znf423Q80TS5 1292 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Zfyve1Q810J8 777 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Reep1Q8BGH4 201 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fam131aQ8BWU3 361 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Arhgap12Q8C0D4 838 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 NclnQ8VCM8 563 aaKnown RBP9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Golga7Q91W53 137 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pcdhb19Q91Y01 801 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Epb41l4bQ9JMC8 527 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rdh11Q9QYF1 316 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Galk1Q9R0N0 392 aa9.56□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fam46dB1ATX6 390 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ddx43D3Z6P9 646 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vmn2r35E9Q7U8 861 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm2888K7N746 267 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 P06324 132 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Eci1P42125 289 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pdx1P52946 284 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Dmrtc1bQ2PMX6 267 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Hephl1Q3V1H3 1159 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 FaddQ61160 205 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Dnajc15Q78YY6 149 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tmem161aQ8VCA6 480 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gtf2h3Q8VD76 309 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Nkd1Q99MH6 471 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Neurl2Q9D0S4 285 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tnfsf13Q9D777 241 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Timm50Q9D880 353 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 EefsecQ9JHW4 583 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tas2r119Q9JKT2 335 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 DguokQ9QX60 277 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Chrna6Q9R0W9 494 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cd320Q9Z1P5 260 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Chil5A0A0G2JDS2 431 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Catsperg2C6KI89 1145 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vmn2r114E9Q281 856 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rnf169E9Q7F2 694 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 2610001J05RikF2Z3Y9 59 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fbxw9F8VPX2 458 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vmn2r86G5E8Y4 848 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm14496K7N5U4 849 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Hsd17b10O08756 261 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 MntO08789 591 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 ApoeP08226 311 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fth1P09528 182 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Zfp28P10078 825 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fv4P11370 679 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Stat6P52633 837 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 E2f2P56931 443 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Q3U7U4 132 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 AbrQ5SSL4 859 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Abcb7Q61102 752 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Znf235Q61116 645 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Larp4bQ6A0A2 741 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Thnsl2Q80W22 483 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vac14Q80WQ2 782 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cyth4Q80YW0 393 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Adgrg3Q8R0T6 542 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mmgt2Q8R3L0 123 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Uts2rQ8VIH9 385 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Coro6Q920M5 471 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Npffr2Q924H0 417 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Wdr89Q9D0R9 386 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 PacrglQ9D3X5 248 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fabp12Q9DAK4 132 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cyb5r1Q9DB73 305 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 HaspinQ9Z0R0 754 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm6685D3YYP3 228 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 4930426L09RikE9Q0N7 123 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 OgdhlE9Q7L0 1029 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm21738J3QP72 227 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Elovl3O35949 271 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Myf6P15375 242 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Foxk1P42128 719 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vbp1P61759 196 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ybx1P62960 322 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tial1P70318 392 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vipr1P97751 459 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Slc22a15Q504N2 544 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ifit3Q64345 403 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Paqr3Q6TCG8 311 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mfn1Q811U4 741 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fam72aQ8BFZ8 149 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Zfp595Q8BIN6 625 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 SgtaQ8BJU0 315 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ppp1r1cQ8BKK4 108 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Asb2Q8K0L0 634 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ccdc59Q8R2N0 240 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms