RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Zim1Q8C393 579 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dclre1cQ8K4J0 705 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmem185bQ8R3R5 350 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Atg12Q9CQY1 141 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 NumbQ9QZS3 653 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Eci2Q9WUR2 391 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm5114W4VSN8 858 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sppl2cA2A6C4 690 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 AgxtO35423 414 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pld2P97813 933 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mpzl3Q3V3F6 237 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Igdcc3Q8BQC3 813 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ctxn3Q8BXZ0 80 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mfsd14bQ8CIA9 507 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mob2Q8VI63 235 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tcam1Q99NB3 548 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 MecrQ9DCS3 373 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr1145A2AVC7 325 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm16434J3QN10 205 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 4930555G01RikL7N253 205 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Il18P70380 192 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm648Q3UJ22 213 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Clptm1lQ8BXA5 539 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Trmt10aQ8C1Z8 328 aaKnown RBP13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 HyiQ8R1F5 277 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmed4Q8R1V4 227 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr1475Q8VEV6 314 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Bap1Q99PU7 728 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cdh13Q9WTR5 714 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Padi4Q9Z183 666 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mamld1P0C6A2 803 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zswim5Q80TC6 1188 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cyp4f15Q99N18 534 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Asb11Q9CQ31 323 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Inpp5aE9QAS7 422 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Nrp2O35375 931 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Limk2O54785 638 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 FcamrQ2TB54 535 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cln6Q3U466 308 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Taar7aQ5QD12 358 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Lrrn1Q61809 716 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cstf2Q8BIQ5 580 aaKnown RBP13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Dupd1Q8BK84 215 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ugt2a3Q8BWQ1 534 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 OsgepQ8BWU5 335 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Setdb2Q8C267 713 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Polr1eQ8K202 482 aaKnown RBP13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pafah2Q8VDG7 390 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr683Q8VGV1 319 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Txndc5Q91W90 417 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Eny2Q9JIX0 101 aaKnown RBP13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Slc5a3Q9JKZ2 718 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Grb14Q9JLM9 538 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PigqQ9QYT7 581 aa13.75□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mpzl2O70255 215 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gdpd4Q3TT99 632 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Q3UE31 404 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Fstl1Q62356 306 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Orai3Q6P8G8 290 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sdr16c5Q7TQA3 309 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sult2a8Q8BGL3 282 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tmem74Q8BQU7 305 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Prkd2Q8BZ03 875 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Hsbp1Q9CQZ1 76 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Rad18Q9QXK2 509 aaKnown RBP13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 TomtA1Y9I9 258 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zfp607bG3X9H3 648 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Abraxas2Q3TCJ1 415 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tas2r106Q7M724 308 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tfb1mQ8JZM0 345 aaKnown RBP13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Eml3Q8VC03 897 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Kcne2Q9D808 123 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Xrn1P97789 1719 aaKnown RBP13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tlx3O55144 291 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sp140Q6NSQ5 534 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 TpbglQ8C013 384 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mtfr2Q8VED8 361 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ccdc166S4R181 449 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm37240E9QAY5 252 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zfp708F8VPP0 541 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Itgb5O70309 798 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ly9Q01965 654 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 GatcQ8CBY0 155 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Q8CCC3 530 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ints12Q9D168 461 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ubqln5Q9D4I8 510 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tex47Q9D5W8 253 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Uba7Q9DBK7 977 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 S1pr4Q9Z0L1 386 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm5485A0A1D5RM98 91 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr239A0PK55 315 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Aldh3b2E9Q3E1 479 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Klhl33G3UW92 533 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr55K7N6Q1 315 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tuba1cP68373 449 aaKnown RBP13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Smpd4Q6ZPR5 823 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ankrd52Q8BTI7 1076 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr1502Q8VG66 316 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr690Q8VH18 315 aa13.74□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Pcdhb13Q91Y06 796 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms