RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ZNF658BQ4V348 819 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 CRTC3Q6UUV7 619 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 UBE2R2Q712K3 238 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 TRPM8Q7Z2W7 1104 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 CUZD1Q86UP6 607 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 PDPRQ8NCN5 879 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 OR2T34Q8NGX1 318 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 AGR3Q8TD06 166 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 ZNF483Q8TF39 744 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 DLG3Q92796 817 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 GLMNQ92990 594 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 TMEM159Q96B96 161 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 LINC00615Q96LM1 132 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 LGR4Q9BXB1 951 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 C1QTNF3Q9BXJ4 246 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 BTBD1Q9H0C5 482 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 WWP1Q9H0M0 922 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 COG4Q9H9E3 785 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 RDH14Q9HBH5 336 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 SGK2Q9HBY8 427 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 PHPT1Q9NRX4 125 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 ABCF3Q9NUQ8 709 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 USP36Q9P275 1121 aaKnown RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 EBF1Q9UH73 591 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 OR1A2Q9Y585 309 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 PCDHGA5Q9Y5G8 931 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 C17orf113A0A1B0GUU1 675 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 SLCO1B7G3V0H7 640 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 LIN7AO14910 233 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 HGSO14964 777 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 DCTN3O75935 186 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 GUCA1CO95843 209 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 ENO2P09104 434 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 HOXA6P31267 233 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 MPLP40238 635 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 IDH3AP50213 366 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 HNRNPH2P55795 449 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 ABRQ12979 859 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 C18orf21Q32NC0 220 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 PLA2G4EQ3MJ16 856 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 FBXO48Q5FWF7 155 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 SH2D4BQ5SQS7 431 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 SULT1C3Q6IMI6 304 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 CCDC121Q6ZUS5 278 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 TRIM69Q86WT6 500 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 ZNF547Q8IVP9 402 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 CFAP206Q8IYR0 622 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 LILRA3Q8N6C8 439 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 TSTD1Q8NFU3 115 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 TRPC4APQ8TEL6 797 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 GAB3Q8WWW8 586 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 ASB11Q8WXH4 323 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 ZCCHC14Q8WYQ9 949 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 FOXJ1Q92949 421 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 NSUN5Q96P11 429 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 EGFL8Q99944 293 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 EBF4Q9BQW3 602 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 SLC12A9Q9BXP2 914 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 TRIM54Q9BYV2 358 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 STN1Q9H668 368 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 PARVBQ9HBI1 364 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 FZD3Q9NPG1 666 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 C2orf42Q9NWW7 574 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 HEY2Q9UBP5 337 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 VTI1BQ9UEU0 232 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 EIF2B4Q9UI10 523 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 PTBP2Q9UKA9 531 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 PCTPQ9UKL6 214 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 PDE10AQ9Y233 779 aa12.81□□□□□ -0.36
PHGDH-221ENST00000641573 PCYT1BQ9Y5K3 369 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 TNPO3Q9Y5L0 923 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 DSPP15924 2871 aaKnown RBP12.81□□□□□ -0.36
PHGDH-221ENST00000641573 GCN1Q92616 2671 aaKnown RBP12.8□□□□□ -0.36
PHGDH-221ENST00000641573 MGAT4DA6NG13 374 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 TMEM233B4DJY2 109 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 GFYI3L273 518 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 MATN2O00339 956 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 UBFD1O14562 309 aaKnown RBP12.8□□□□□ -0.36
PHGDH-221ENST00000641573 CHUKO15111 745 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 HDAC3O15379 428 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 TAPBPO15533 448 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 GRID2O43424 1007 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 KIAA0754O94854 1291 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 MATN4O95460 622 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 SEMA4FO95754 770 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 IGLV3-19P01714 112 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 MYCLP1P12525 358 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-221ENST00000641573 SPINK2P20155 84 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 CYP2A7P20853 494 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 RPIAP49247 311 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 CLCQ05315 142 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 PCBP2Q15366 365 aaKnown RBP eCLIP12.8□□□□□ -0.36
PHGDH-221ENST00000641573 CDKL4Q5MAI5 379 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 VWA5B1Q5TIE3 1220 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 ANO7Q6IWH7 933 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 C11orf96Q7Z7L8 435 aa12.8□□□□□ -0.36
PHGDH-221ENST00000641573 LRRTM4Q86VH4 590 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms