RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RPS14P62263 151 aaKnown RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 PLOD1Q02809 727 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 STX5Q13190 355 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 PTK2BQ14289 1009 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 C6orf163Q5TEZ5 329 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 C16orf89Q6UX73 402 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 SPATA19Q7Z5L4 167 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 ULK2Q8IYT8 1036 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 DCBLD1Q8N8Z6 715 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 KYQ8NBH2 561 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 LINC00615Q96LM1 132 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 DENND2DQ9H6A0 471 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 ATXN10Q9UBB4 475 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 FAM8A1Q9UBU6 413 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 COL4A2P08572 1712 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 A0A1W2PP55 124 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 IGLON5A6NGN9 336 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 AIM2O14862 343 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 RNASEH2AO75792 299 aaKnown RBP16.06■□□□□ 0.16
PHGDH-216ENST00000641375 CATP04040 527 aaKnown RBP16.06■□□□□ 0.16
PHGDH-216ENST00000641375 ALDOCP09972 364 aaKnown RBP16.06■□□□□ 0.16
PHGDH-216ENST00000641375 PRR35P0CG20 571 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 IDO1P14902 403 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 ITGAXP20702 1163 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 DRD1P21728 446 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 NUDT2P50583 147 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 GSTA3Q16772 222 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 TMEM196Q5HYL7 178 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 PNCKQ6P2M8 343 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 TRIM74Q86UV6 250 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 IL17RCQ8NAC3 791 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 EBF2Q9HAK2 575 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 PIAS3Q9Y6X2 628 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 F5P12259 2224 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 H3BM21 787 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 H3BQ06 376 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-216ENST00000641375 LILRB5O75023 590 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 CIB2O75838 187 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 DNTTP04053 509 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 GRSF1Q12849 480 aaKnown RBP eCLIP16.06■□□□□ 0.16
PHGDH-216ENST00000641375 PON2Q15165 354 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 KIF19Q2TAC6 998 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 AGKQ53H12 422 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 FAM219BQ5XKK7 198 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 RNF165Q6ZSG1 346 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 DEFB107AQ8IZN7 70 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 ATL1Q8WXF7 558 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 DNASE1L2Q92874 299 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 COX14Q96I36 57 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 CCDC167Q9P0B6 97 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 TRPS1Q9UHF7 1281 aa16.06■□□□□ 0.16
PHGDH-216ENST00000641375 C2CD4DB7Z1M9 353 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 EGFP01133 1207 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 HOXB2P14652 356 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 PBLDP30039 288 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-216ENST00000641375 SLC6A12P48065 614 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 PREPP48147 710 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 ABRQ12979 859 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 GRB7Q14451 532 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 ZNF658BQ4V348 819 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-216ENST00000641375 KIAA1211LQ6NV74 962 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 IL27RAQ6UWB1 636 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 MIER2Q8N344 545 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 FBXL8Q96CD0 374 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 RCN3Q96D15 328 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 SLC25A23Q9BV35 468 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 MRPL1Q9BYD6 325 aaKnown RBP16.05■□□□□ 0.16
PHGDH-216ENST00000641375 MKRN2Q9H000 416 aaKnown RBP16.05■□□□□ 0.16
PHGDH-216ENST00000641375 FBXL12Q9NXK8 326 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 SERGEFQ9UGK8 458 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
PHGDH-216ENST00000641375 A0A088AWK7 358 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 WDR47O94967 919 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 SNRPB2P08579 225 aaKnown RBP16.04■□□□□ 0.16
PHGDH-216ENST00000641375 CCND1P24385 295 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 GRIK2Q13002 908 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 ART3Q13508 389 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 RPS6KA2Q15349 733 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 ATP6AP1LQ52LC2 224 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 NET1Q7Z628 596 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-216ENST00000641375 HEATR4Q86WZ0 1026 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 PLA2G15Q8NCC3 412 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 CFAP61Q8NHU2 1237 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 GANCQ8TET4 914 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 FAM131CQ96AQ9 280 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 CCDC138Q96M89 665 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 KCNK12Q9HB15 430 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 HEBP1Q9NRV9 189 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 PEX11AO75192 247 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 CLDN9O95484 217 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 KLF8O95600 359 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-216ENST00000641375 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
PHGDH-216ENST00000641375 PCCBP05166 539 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 CD1EP15812 388 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 ZNF8P17098 575 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-216ENST00000641375 TEAD1P28347 426 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 MRPL19P49406 292 aaKnown RBP16.04■□□□□ 0.16
PHGDH-216ENST00000641375 ERVK-8P63133 956 aa16.04■□□□□ 0.16
PHGDH-216ENST00000641375 RPS21P63220 83 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms