RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ELMSAN1Q6PJG2 1045 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 RGL4Q8IZJ4 473 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 USP7Q93009 1102 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 CGREF1Q99674 301 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 PIF1Q9H611 641 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 PKD2L2Q9NZM6 624 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 ERVW-1Q9UQF0 538 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 INSL6Q9Y581 213 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 MYO7AQ13402 2215 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
PHGDH-211ENST00000641213 ARHGAP10A1A4S6 786 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 CLDN9O95484 217 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 RHOP08100 348 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ATP1B2P14415 290 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 INTS11Q5TA45 600 aaKnown RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 BRAT1Q6PJG6 821 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 SATL1Q86VE3 508 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 RALGPS2Q86X27 583 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 CARM1Q86X55 608 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 EPHX4Q8IUS5 362 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 VRK3Q8IV63 474 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 PLPP6Q8IY26 295 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 CENPNQ96H22 339 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 SLC12A9Q9BXP2 914 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 SLC29A3Q9BZD2 475 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 PARVBQ9HBI1 364 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 DUS2Q9NX74 493 aaKnown RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ZNHIT2Q9UHR6 403 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 MYOCOSA0A1B0GUC4 107 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ENO4A6NNW6 628 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 NUAK1O60285 661 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 SEC22BO75396 215 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 CLPTM1O96005 669 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 FESP07332 822 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 C8GP07360 202 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 UMPSP11172 480 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 AKT1P31749 480 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 RECQLP46063 649 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 CCT8P50990 548 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ZNF77Q15935 545 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 IMPG1Q17R60 797 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 CNPY1Q3B7I2 92 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 NHSL2Q5HYW2 709 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 TTC23LQ6PF05 361 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 PROSER1Q86XN7 944 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 LIX1Q8N485 282 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 PACRGLQ8N7B6 248 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ZNF557Q8N988 423 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 PAPD5Q8NDF8 572 aaKnown RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ASB11Q8WXH4 323 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 BIRC7Q96CA5 298 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 MTFMTQ96DP5 389 aaKnown RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 PRPF18Q99633 342 aaKnown RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 RPF2Q9H7B2 306 aaKnown RBP16.69■□□□□ 0.26
PHGDH-211ENST00000641213 LRTM1Q9HBL6 345 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ZFP14Q9HCL3 533 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 ANAPC2Q9UJX6 822 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 NEUROG3Q9Y4Z2 214 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 PCDHB3Q9Y5E6 796 aa16.69■□□□□ 0.26
PHGDH-211ENST00000641213 KANSL1LA0AUZ9 987 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 AHCYL1O43865 530 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 TFAP2AP05549 437 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 MPC1LP0DKB6 136 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 ZNF30P17039 623 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 MTPNP58546 118 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 PLIN5Q00G26 463 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 HSD11B1LQ7Z5J1 315 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 KIAA0907Q7Z7F0 614 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 CBR4Q8N4T8 237 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 NAT16Q8N8M0 369 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 FRS2Q8WU20 508 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SKA2Q8WVK7 121 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SLC13A3Q8WWT9 602 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SCAMP4Q969E2 229 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 ZBTB18Q99592 522 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 HEPHQ9BQS7 1158 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 MRPS26Q9BYN8 205 aaKnown RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 ACTR8Q9H981 624 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SLC24A3Q9HC58 644 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SMOXQ9NWM0 555 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 ASIC5Q9NY37 505 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 TBC1D14Q9P2M4 693 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 HCFC2Q9Y5Z7 792 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 LRRK1Q38SD2 2015 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 TTC34A8MYJ7 566 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 PDLIM1O00151 329 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 MTX2O75431 263 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 LEFTY1O75610 366 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 KCNH1O95259 989 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 CYP2A6P11509 494 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 FCGR1AP12314 374 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 POLR2EP19388 210 aaKnown RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 VIPR1P32241 457 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 RPL5P46777 297 aaKnown RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 BOP1Q14137 746 aaKnown RBP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 CPSF6Q16630 551 aaKnown RBP eCLIP16.68■□□□□ 0.26
PHGDH-211ENST00000641213 PLEKHS1Q5SXH7 462 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 CACHD1Q5VU97 1274 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SUSD1Q6UWL2 747 aa16.68■□□□□ 0.26
PHGDH-211ENST00000641213 SERPINA13PQ6UXR4 307 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms