RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TCFL5Q9UL49 500 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 SNX7Q9UNH6 387 aa17.9■□□□□ 0.46
CLN6-220ENST00000637450 MROH6A6NGR9 719 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 C2orf74A8MZ97 194 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 CYP2A7P20853 494 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 PTGIRP43119 386 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 LMAN1P49257 510 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 PGDP52209 483 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 VAV2P52735 878 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 KLF1Q13351 362 aaPredicted RBP17.89■□□□□ 0.45
CLN6-220ENST00000637450 POU6F1Q14863 301 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 HGH1Q9BTY7 390 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 KLHL25Q9H0H3 589 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 ACTR10Q9NZ32 417 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 PRSS21Q9Y6M0 314 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 USP9XQ93008 2570 aaPredicted RBP17.89■□□□□ 0.45
CLN6-220ENST00000637450 SPTBP11277 2137 aa17.89■□□□□ 0.45
CLN6-220ENST00000637450 USP9YO00507 2555 aaPredicted RBP17.88■□□□□ 0.45
CLN6-220ENST00000637450 NBPF19A0A087WUL8 3843 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 LIN7AO14910 233 aaPredicted RBP17.88■□□□□ 0.45
CLN6-220ENST00000637450 PSMD3O43242 534 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 CEACAM4O75871 244 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 AP2A1O95782 977 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 PVRP15151 417 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 NSG1P42857 185 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 GDF10P55107 478 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 P3H1Q32P28 736 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 FAM69BQ5VUD6 431 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 SPESP1Q6UW49 350 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 FAM198BQ6UWH4 519 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 CDHR3Q6ZTQ4 885 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 PEX26Q7Z412 305 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 SYTL1Q8IYJ3 562 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 UBL4BQ8N7F7 174 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 SLC35B2Q8TB61 432 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 DPH2Q9BQC3 489 aaPredicted RBP17.88■□□□□ 0.45
CLN6-220ENST00000637450 PIH1D1Q9NWS0 290 aaKnown RBP17.88■□□□□ 0.45
CLN6-220ENST00000637450 SMARCAL1Q9NZC9 954 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 R3HDM2Q9Y2K5 976 aaKnown RBP17.88■□□□□ 0.45
CLN6-220ENST00000637450 SEC16AO15027 2179 aa17.88■□□□□ 0.45
CLN6-220ENST00000637450 RP1L1Q8IWN7 2480 aaPredicted RBP17.87■□□□□ 0.45
CLN6-220ENST00000637450 TTLL8A6PVC2 850 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 MIF4GDA9UHW6 222 aaKnown RBP17.87■□□□□ 0.45
CLN6-220ENST00000637450 E7EQ34 232 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 ZNF749O43361 778 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 TMEM63AO94886 807 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 PTMAP06454 111 aaKnown RBP17.87■□□□□ 0.45
CLN6-220ENST00000637450 ACADLP28330 430 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 ITGA1P56199 1179 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 ITIH4Q14624 930 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 PTCHD3Q3KNS1 767 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 NADK2Q4G0N4 442 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 UNC5AQ6ZN44 842 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 OR5AR1Q8NGP9 310 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 ALS2CR12Q96Q35 445 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 TMEM121Q9BTD3 319 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 PACSIN2Q9UNF0 486 aaPredicted RBP17.87■□□□□ 0.45
CLN6-220ENST00000637450 ICKQ9UPZ9 632 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 PCDHGB7Q9Y5F8 929 aa17.87■□□□□ 0.45
CLN6-220ENST00000637450 QSOX1O00391 747 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 HBQ1P09105 142 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 TPBGLP0DKB5 382 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 ZNF385CQ66K41 422 aaPredicted RBP17.86■□□□□ 0.45
CLN6-220ENST00000637450 PACS1Q6VY07 963 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 TBC1D21Q8IYX1 336 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 SYCE1Q8N0S2 351 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 ZBTB2Q8N680 514 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 CPT1CQ8TCG5 803 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLN6-220ENST00000637450 PSMG3-AS1Q96PY0 264 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 OR2A14Q96R47 310 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 SLC7A5P2Q9GIP4 190 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 FAM60AQ9NP50 221 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 POLG2Q9UHN1 485 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 ASF1AQ9Y294 204 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 ZNF451Q9Y4E5 1061 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 MED13Q9UHV7 2174 aa17.86■□□□□ 0.45
CLN6-220ENST00000637450 TCRBV7S2A1N4TA0A589 114 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 SLC5A10A0PJK1 596 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 CCDC78A2IDD5 438 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 OR51F1A6NGY5 319 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 H3BMH7 237 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 VPS4BO75351 444 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 FTH1P02794 183 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 GP1BBP13224 206 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 UGT2B7P16662 529 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 AGXTP21549 392 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 MSNP26038 577 aaKnown RBP17.85■□□□□ 0.45
CLN6-220ENST00000637450 FOXN2P32314 431 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 SHMT2P34897 504 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 BRD3Q15059 726 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 NCF4Q15080 339 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 ZIC1Q15915 447 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 MED25Q71SY5 747 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 KIAA1328Q86T90 577 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 LINC00523Q86TU6 105 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 HOOK3Q86VS8 718 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 GPR135Q8IZ08 494 aa17.85■□□□□ 0.45
CLN6-220ENST00000637450 TAB3Q8N5C8 712 aaPredicted RBP17.85■□□□□ 0.45
CLN6-220ENST00000637450 C19orf47Q8N9M1 422 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms