RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 A8MX80 341 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 LOC730098B7Z3J9 87 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 NUAK1O60285 661 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SEC22BO75396 215 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 AP2A2O94973 939 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 TFAP2AP05549 437 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 PRPS2P11908 318 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 PABPC1P11940 636 aaKnown RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 CDH1P12830 882 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 CA5AP35218 305 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 CTSOP43234 321 aaPredicted RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 SPINT3P49223 89 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 STK19P49842 368 aaPredicted RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 TUBA4AP68366 448 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 PLOD1Q02809 727 aaPredicted RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 APOFQ13790 326 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 MAPKAPK3Q16644 382 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 ATP13A5Q4VNC0 1218 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 NHSL2Q5HYW2 709 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 BORAQ6PGQ7 559 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 DLEU7Q6UYE1 221 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 GDPD4Q6W3E5 623 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 NEK10Q6ZWH5 1172 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SPRED1Q7Z699 444 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SATL1Q86VE3 508 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 CBR4Q8N4T8 237 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 TRIML2Q8N7C3 387 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 TFAP2CQ92754 450 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 TRIM43Q96BQ3 446 aaPredicted RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 RMND5BQ96G75 393 aaPredicted RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 UGT2B28Q9BY64 529 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 C1orf109Q9NX04 203 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SOCS2O14508 198 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 RASAL1O95294 804 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 UGT2B4P06133 528 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 ANXA6P08133 673 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 ACRP10323 421 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 ATP1B2P14415 290 aaPredicted RBP11.87□□□□□ -0.51
CLN8-212ENST00000637083 PTPN2P17706 415 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 AOAHP28039 575 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 AP1S2P56377 157 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 DPY19L3Q6ZPD9 716 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 ALDH16A1Q8IZ83 802 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 TSPAN14Q8NG11 270 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 BIRC7Q96CA5 298 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 TMEM74Q96NL1 305 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 BBS2Q9BXC9 721 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 ACTL8Q9H568 366 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 PIDD1Q9HB75 910 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SMOXQ9NWM0 555 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SLAMF8Q9P0V8 285 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 DMTF1Q9Y222 760 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 RNF11Q9Y3C5 154 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
CLN8-212ENST00000637083 SCN8AQ9UQD0 1980 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 NRG2O14511 850 aaPredicted RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 FFAR3O14843 346 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 GSTA4O15217 222 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 GPR42O15529 346 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 C1SP09871 688 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 MTHFD1P11586 935 aaKnown RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 ATP6V1B1P15313 513 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 GJA1P17302 382 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CCR7P32248 378 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 GDF5P43026 501 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 ZNF33BQ06732 778 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 MERTKQ12866 999 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 KCNC3Q14003 757 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 KIAA0040Q15053 153 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 LRRC26Q2I0M4 334 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 SLC5A9Q2M3M2 681 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 FAM98BQ52LJ0 330 aaKnown RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 CWF19L1Q69YN2 538 aaKnown RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 ADGRG2Q8IZP9 1017 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 MCOLN3Q8TDD5 553 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 IRF7Q92985 503 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 OTUB2Q96DC9 234 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CCDC97Q96F63 343 aaPredicted RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 PPM1MQ96MI6 270 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CCDC115Q96NT0 180 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 HEPHQ9BQS7 1158 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 BEGAINQ9BUH8 593 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 ADI1Q9BV57 179 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 ELOVL6Q9H5J4 265 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 RMND5AQ9H871 391 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CLK4Q9HAZ1 481 aaKnown RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 DUS2Q9NX74 493 aaKnown RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 TUBA8Q9NY65 449 aaPredicted RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 B4GALT6Q9UBX8 382 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 TMED5Q9Y3A6 229 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 NEDD8-MDP1E9PL57 170 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 H3BNH8 94 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 CCL16O15467 120 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 TPST1O60507 370 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 DEAF1O75398 565 aaPredicted RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 RSL1D1O76021 490 aaKnown RBP11.86□□□□□ -0.51
CLN8-212ENST00000637083 FTH1P02794 183 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 RAP2AP10114 183 aa11.86□□□□□ -0.51
CLN8-212ENST00000637083 NCK1P16333 377 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms