RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	ZNF683	Q8IZ20	524 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	STON2	Q8WXE9	905 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	RORB	Q92753	470 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	EBPL	Q9BY08	206 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ABCG2	Q9UNQ0	655 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	CAB39	Q9Y376	341 aa	Predicted RBP	12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FAM92A	A1XBS5	289 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FKBP9	O95302	570 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PRR35	P0CG20	571 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	BMP4	P12644	408 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	CDKN2C	P42773	168 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GATM	P50440	423 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	IL10RB	Q08334	325 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TUSC3	Q13454	348 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	LRRC73	Q5JTD7	316 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FAM171A1	Q5VUB5	890 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TTC23	Q5W5X9	447 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TMEM53	Q6P2H8	277 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FKBP9P1	Q75LS8	142 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	CYP4Z1	Q86W10	505 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	MSRB3	Q8IXL7	192 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ULK4	Q96C45	1275 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	BTN2A3P	Q96KV6	586 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	OSBPL10	Q9BXB5	764 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ATP13A3	Q9H7F0	1226 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ELOVL2	Q9NXB9	296 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GNPTG	Q9UJJ9	305 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GIT1	Q9Y2X7	761 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PCDHB14	Q9Y5E9	798 aa		12.79	□□□□□ -0.36
CHRNA7-223	ENST00000637033	OTOF	Q9HC10	1997 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	C16orf96	A6NNT2	1141 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033		H0YAE9	185 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PRL	P01236	227 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PGR	P06401	933 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	RPL17	P18621	184 aa	Known RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TACR1	P25103	407 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GSTM2	P28161	218 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	RPL9	P32969	192 aa	Known RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	OXCT1	P55809	520 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ISL1	P61371	349 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PWP1	Q13610	501 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	CTXN3	Q4LDR2	81 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	CARD16	Q5EG05	197 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	NIPAL1	Q6NVV3	410 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	LRRC8D	Q7L1W4	858 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	NECAB2	Q7Z6G3	386 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ARL10	Q8N8L6	244 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GTF2H4	Q92759	462 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ISG20	Q96AZ6	181 aa	Known RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FAM120B	Q96EK7	910 aa	Known RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	BRINP2	Q9C0B6	783 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	SIAE	Q9HAT2	523 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	WWOX	Q9NZC7	414 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FCF1	Q9Y324	198 aa	Known RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	LOC100506127	A0A0U1RQW1	187 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ZNF99	A8MXY4	864 aa	Predicted RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	LOC730098	B7Z3J9	87 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033		K7ERQ8	282 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	HAS3	O00219	553 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PER2	O15055	1255 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PRAMEF11	O60813	436 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GJB5	O95377	273 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TACR2	P21452	398 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	HOXD12	P35452	270 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	SLC26A3	P40879	764 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ZNF140	P52738	457 aa	Predicted RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	NUDT6	P53370	316 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FOXM1	Q08050	763 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	CDK5R2	Q13319	367 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TP53BP2	Q13625	1128 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	DDX39B	Q13838	428 aa	Known RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	EID3	Q8N140	333 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PAPD5	Q8NDF8	572 aa	Known RBP	12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TPD52L3	Q96J77	140 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	UGT2B28	Q9BY64	529 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GPR63	Q9BZJ6	419 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ROGDI	Q9GZN7	287 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GIN1	Q9NXP7	522 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	DNAJB9	Q9UBS3	223 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PRSS21	Q9Y6M0	314 aa		12.78	□□□□□ -0.36
CHRNA7-223	ENST00000637033		F5H5T6	163 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	FFAR2	O15552	330 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	TBX1	O43435	398 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	CREG1	O75629	220 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	MYO1D	O94832	1006 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	MT-ND2	P03891	347 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	DBT	P11182	482 aa	Known RBP	12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	GTF2E2	P29084	291 aa	Known RBP	12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	PHC1	P78364	1004 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	MVK	Q03426	396 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	EPS8	Q12929	822 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	RGL4	Q8IZJ4	473 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ZBTB18	Q99592	522 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	NLE1	Q9NVX2	485 aa	Predicted RBP	12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	ZIM2	Q9NZV7	527 aa		12.77	□□□□□ -0.36
CHRNA7-223	ENST00000637033	UBA2	Q9UBT2	640 aa	Predicted RBP	12.77	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms