RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PRRC1Q96M27 445 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF317Q96PQ6 595 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 BTBD9Q96Q07 612 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 CIB1Q99828 191 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 SMOC2Q9H3U7 446 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 MINDY3Q9H8M7 445 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 LMAN1LQ9HAT1 526 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 C12orf10Q9HB07 376 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 GPAMQ9HCL2 828 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 ZFP14Q9HCL3 533 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 GCM1Q9NP62 436 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 KCNMB3Q9NPA1 279 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 SLAMF7Q9NQ25 335 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 MRPL40Q9NQ50 206 aaKnown RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 XPNPEP3Q9NQH7 507 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 MAN2C1Q9NTJ4 1040 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 HIF1ANQ9NWT6 349 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 TAS2R7Q9NYW3 318 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 CNOT2Q9NZN8 540 aaKnown RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 DBNLQ9UJU6 430 aaKnown RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 NFU1Q9UMS0 254 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 MAU2Q9Y6X3 613 aa4.77□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF644Q9H582 1327 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-213ENST00000630925 ANKRD30AQ9BXX3 1397 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 A0A1W2PRX2 142 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 KANSL1LA0AUZ9 987 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 DCDC2BA2VCK2 349 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ASB14A6NK59 587 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF839A8K0R7 811 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 TMPRSS2O15393 492 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 AP5Z1O43299 807 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 HS6ST1O60243 411 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PDE5AO76074 875 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 BCL10O95999 233 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 CD1AP06126 327 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 MMP9P14780 707 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ITGB6P18564 788 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 GNAZP19086 355 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 FGFR3P22607 806 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 FPR2P25090 351 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 HOXA9P31269 272 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 SLC6A4P31645 630 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 CSF2RBP32927 897 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 VIPR2P41587 438 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 MMP13P45452 471 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PTDSS1P48651 473 aaKnown RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 CSNK1EP49674 416 aaKnown RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 HNRNPFP52597 415 aaKnown RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 EPHA5P54756 1037 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 P2RX3P56373 397 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 SOX10P56693 466 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 RAB14P61106 215 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ID3Q02535 119 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 CXCL9Q07325 125 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 DMP1Q13316 513 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 UBAP2LQ14157 1087 aaKnown RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 SCARF1Q14162 830 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 MOGAT2Q3SYC2 334 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 WSCD1Q658N2 575 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 TMEM81Q6P7N7 255 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 SHISA2Q6UWI4 295 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 TRIM67Q6ZTA4 783 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PAQR9Q6ZVX9 377 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 FRA10AC1Q70Z53 315 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 GPRIN1Q7Z2K8 1008 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PRRT2Q7Z6L0 340 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 TECPR1Q7Z6L1 1165 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 VTCN1Q7Z7D3 282 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 FAM219AQ8IW50 185 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 CHERPQ8IWX8 916 aaKnown RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 MINDY2Q8NBR6 621 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 STKLD1Q8NE28 680 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 OR4K14Q8NGD5 310 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 OR9K2Q8NGE7 335 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 FAM110DQ8TAY7 271 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PIGBQ92521 554 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PIGKQ92643 395 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 RAB1CQ92928 201 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ESAMQ96AP7 390 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PGBD1Q96JS3 809 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 NPY6RQ99463 290 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 SLC29A1Q99808 456 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 FAM110AQ9BQ89 295 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PARD6GQ9BYG4 376 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 FOXQ1Q9C009 403 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 CTDSP1Q9GZU7 261 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 MFFQ9GZY8 342 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 DDX47Q9H0S4 455 aaKnown RBP4.76□□□□□ -1.65
SDCBP-213ENST00000630925 LRMDAQ9H2I8 198 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 CENPHQ9H3R5 247 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 PDZD7Q9H5P4 517 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ATP13A3Q9H7F0 1226 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 SRD5A3Q9H8P0 318 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ANKZF1Q9H8Y5 726 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ONECUT1Q9UBC0 465 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 ZBTB1Q9Y2K1 713 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 LRRC42Q9Y546 428 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 EEA1Q15075 1411 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 MAST3O60307 1309 aa4.76□□□□□ -1.65
SDCBP-213ENST00000630925 EIF2AK4Q9P2K8 1649 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms