RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CD320Q9NPF0 282 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 OXSMQ9NWU1 459 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 ABCA7Q8IZY2 2146 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 LIN7AO14910 233 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 AHSGP02765 367 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 RABIFP47224 123 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 CLCNKAP51800 687 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 PPP2CBP62714 309 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 PPP2CAP67775 309 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC34A1Q06495 639 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 DLG1Q12959 904 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SRSF5Q13243 272 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZNF460Q14592 562 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC14A2Q15849 920 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC9B1Q4ZJI4 515 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 NEK5Q6P3R8 708 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 RIPOR1Q6ZS17 1223 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 LSMEM2Q8N112 164 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 C2orf73Q8N5S3 287 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 KCTD4Q8WVF5 259 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 C12orf66Q96MD2 445 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 TREX1Q9NSU2 369 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 EVA1BQ9NVM1 165 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 INTS10Q9NVR2 710 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 R4GN57 208 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 CPED1A4D0V7 1026 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 SUPT7LO94864 414 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 TAS2R39P59534 338 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 PTSQ03393 145 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 KIF19Q2TAC6 998 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 WSCD2Q2TBF2 565 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 CILP2Q8IUL8 1156 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 CDC26Q8NHZ8 85 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 BIRC7Q96CA5 298 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 LRGUKQ96M69 825 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 MRPL1Q9BYD6 325 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 GSDMCQ9BYG8 508 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 ITM2CQ9NQX7 267 aa12.22□□□□□ -0.45
SYNGAP1-207ENST00000628646 RGSL1A5PLK6 1076 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 HDAC3O15379 428 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 TFEBP19484 476 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 CCR10P46092 362 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 NAGLUP54802 743 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 PTPN5P54829 565 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 SNAP47Q5SQN1 464 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZSWIM9Q86XI8 627 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 GPSM1Q86YR5 675 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 HCAR2Q8TDS4 363 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 GLMNQ92990 594 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC6A18Q96N87 628 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 OR2M4Q96R27 311 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 RANBP9Q96S59 729 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 TRIM39Q9HCM9 518 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 TNFRSF10AO00220 468 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 KMOO15229 486 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 RAD51BO15315 384 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 AVPR2P30518 371 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 COL19A1Q14993 1142 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 AGBL4Q5VU57 503 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 PNCKQ6P2M8 343 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 CEP97Q8IW35 865 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 TRMOQ9BU70 441 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 ACAT2Q9BWD1 397 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 COG4Q9H9E3 785 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 EFCAB1Q9HAE3 211 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 KLHL3Q9UH77 587 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 DMTF1Q9Y222 760 aa12.21□□□□□ -0.45
SYNGAP1-207ENST00000628646 A0A1W2PQF6 199 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 RHPN2P1A8MT19 583 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZW10O43264 779 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 GAB4Q2WGN9 574 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 PIP5KL1Q5T9C9 394 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 FRMD1Q8N878 549 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 CEP70Q8NHQ1 597 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 BOCQ9BWV1 1114 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 GATA5Q9BWX5 397 aaPredicted RBP12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 BATF3Q9NR55 127 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 SPASTQ9UBP0 616 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 TMCO1Q9UM00 188 aa12.21□□□□□ -0.46
SYNGAP1-207ENST00000628646 GSAPA4D1B5 854 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 H0Y8X5 98 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 TK2O00142 265 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 CCNT2O60583 730 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 CHRNGP07510 517 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 SLC25A3Q00325 362 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 LRRC74BQ6ZQY2 392 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 OR56A4Q8NGH8 313 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 PEX13Q92968 403 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 ARNTLO00327 626 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 FKBP6O75344 327 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 PREPP48147 710 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 DDX39BQ13838 428 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 TRIM61Q5EBN2 209 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 RBM20Q5T481 1227 aaKnown RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 UBE2R2Q712K3 238 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 PIANPQ8IYJ0 282 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 POU5F2Q8N7G0 328 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 PCYOX1LQ8NBM8 494 aa12.2□□□□□ -0.46
SYNGAP1-207ENST00000628646 OR52B2Q96RD2 323 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms