RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SERPINB12Q96P63 405 aa21.71■■□□□ 1.07
SF1-220ENST00000626028 ULBP3Q9BZM4 244 aa21.71■■□□□ 1.07
SF1-220ENST00000626028 OR6C2Q9NZP2 312 aa21.71■■□□□ 1.07
SF1-220ENST00000626028 PCDHGA4Q9Y5G9 962 aa21.71■■□□□ 1.07
SF1-220ENST00000626028 MRFAP1Q9Y605 127 aa21.71■■□□□ 1.07
SF1-220ENST00000626028 COL6A6A6NMZ7 2263 aa21.71■■□□□ 1.07
SF1-220ENST00000626028 ZNF185O15231 689 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 MAP3K7O43318 606 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 AVILO75366 819 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 TMEM63AO94886 807 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 MT-ND3P03897 115 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 ARCN1P48444 511 aaKnown RBP21.7■■□□□ 1.06
SF1-220ENST00000626028 GNG11P61952 73 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 TUBB4BP68371 445 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 SH3BP2P78314 561 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 TUBB3Q13509 450 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 TUBB2AQ13885 445 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 PPP1R7Q15435 360 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 ANKRD22Q5VYY1 191 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 CASC4Q6P4E1 433 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 SYDE1Q6ZW31 735 aaPredicted RBP21.7■■□□□ 1.06
SF1-220ENST00000626028 LMNTD2Q8IXW0 634 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 NAT8LQ8N9F0 302 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 PHC3Q8NDX5 983 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 TTC9Q92623 222 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 TUBB2BQ9BVA1 445 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 PITPNM3Q9BZ71 974 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 TWSG1Q9GZX9 223 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 LATS2Q9NRM7 1088 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 RNF14Q9UBS8 474 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 RARRES3Q9UL19 164 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 CDYLQ9Y232 598 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 SAR1BQ9Y6B6 198 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 SPTBP11277 2137 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 SEC16AO15027 2179 aa21.7■■□□□ 1.06
SF1-220ENST00000626028 USP27XA6NNY8 438 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 ESR1P03372 595 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 POLR2CP19387 275 aaPredicted RBP21.69■■□□□ 1.06
SF1-220ENST00000626028 UNC5DQ6UXZ4 953 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 VASH2Q86V25 355 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 RASGRP3Q8IV61 690 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 OR5AR1Q8NGP9 310 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 NAPGQ99747 312 aaPredicted RBP21.69■■□□□ 1.06
SF1-220ENST00000626028 HGH1Q9BTY7 390 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 FGF21Q9NSA1 209 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 INTS10Q9NVR2 710 aaKnown RBP21.69■■□□□ 1.06
SF1-220ENST00000626028 WDR70Q9NW82 654 aa21.69■■□□□ 1.06
SF1-220ENST00000626028 CTAGE9A4FU28 777 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 EIF4E1BA6NMX2 242 aaKnown RBP21.68■■□□□ 1.06
SF1-220ENST00000626028 BTN3A1O00481 513 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 FOLR1P15328 257 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 CDH3P22223 829 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 PRDX3P30048 256 aaKnown RBP21.68■■□□□ 1.06
SF1-220ENST00000626028 STAT5AP42229 794 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 HSPA14Q0VDF9 509 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 PTK6Q13882 451 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 BRD3Q15059 726 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 ANKRD20A4Q4UJ75 823 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 CRTC2Q53ET0 693 aaPredicted RBP21.68■■□□□ 1.06
SF1-220ENST00000626028 NEPROQ6NW34 567 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 TIPARPQ7Z3E1 657 aaKnown RBP21.68■■□□□ 1.06
SF1-220ENST00000626028 LDB1Q86U70 411 aaPredicted RBP21.68■■□□□ 1.06
SF1-220ENST00000626028 HOOK3Q86VS8 718 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 ADGRF3Q8IZF5 1079 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 OTUD6BQ8N6M0 293 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 GSDMBQ8TAX9 411 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 SLC39A7Q92504 469 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 SLC45A3Q96JT2 553 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 BBC3Q96PG8 261 aaPredicted RBP21.68■■□□□ 1.06
SF1-220ENST00000626028 CHRNA10Q9GZZ6 450 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 KCND1Q9NSA2 647 aa21.68■■□□□ 1.06
SF1-220ENST00000626028 GSAPA4D1B5 854 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 SMAPO00193 183 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 BTN3A3O00478 584 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 SPAG6O75602 509 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 USP1O94782 785 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 LIFP15018 202 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 PRKG2Q13237 762 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 DHX34Q14147 1143 aaKnown RBP21.67■■□□□ 1.06
SF1-220ENST00000626028 PLEKHS1Q5SXH7 462 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 RNASEH2BQ5TBB1 312 aaKnown RBP21.67■■□□□ 1.06
SF1-220ENST00000626028 C6orf15Q6UXA7 325 aaPredicted RBP21.67■■□□□ 1.06
SF1-220ENST00000626028 OTOAQ7RTW8 1153 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 CREG2Q8IUH2 290 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 CILP2Q8IUL8 1156 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 LPGAT1Q92604 370 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 BIRC8Q96P09 236 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 NAT9Q9BTE0 207 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 FAM117AQ9C073 453 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 DDX47Q9H0S4 455 aaKnown RBP21.67■■□□□ 1.06
SF1-220ENST00000626028 GPN2Q9H9Y4 310 aaPredicted RBP21.67■■□□□ 1.06
SF1-220ENST00000626028 FANCEQ9HB96 536 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 ICKQ9UPZ9 632 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 RPS6KL1Q9Y6S9 549 aa21.67■■□□□ 1.06
SF1-220ENST00000626028 PIEZO2Q9H5I5 2752 aa21.66■■□□□ 1.06
SF1-220ENST00000626028 PIPSLA2A3N6 862 aa21.66■■□□□ 1.06
SF1-220ENST00000626028 ZNF891A8MT65 544 aaPredicted RBP21.66■■□□□ 1.06
SF1-220ENST00000626028 CCDC188H7C350 402 aa21.66■■□□□ 1.06
SF1-220ENST00000626028 CCNYL3P0C7X3 344 aa21.66■■□□□ 1.06
SF1-220ENST00000626028 EBLN1P0CF75 366 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms