RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 HAS2Q92819 552 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 NINJ1Q92982 152 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 MAGED4Q96JG8 741 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 TTC25Q96NG3 672 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 SPSB2Q99619 263 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 TRIM7Q9C029 511 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX1-214ENST00000625244 GANQ9H2C0 597 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 RAD18Q9NS91 495 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 TXLNGQ9NUQ3 528 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 SEPT11Q9NVA2 429 aaKnown RBP13.37□□□□□ -0.27
SNX1-214ENST00000625244 PTGFRNQ9P2B2 879 aa13.37□□□□□ -0.27
SNX1-214ENST00000625244 OR2AG2A6NM03 316 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
SNX1-214ENST00000625244 ZSCAN9O15535 394 aaPredicted RBP13.36□□□□□ -0.27
SNX1-214ENST00000625244 HLA-DQB2P05538 268 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 EEF1GP26641 437 aaKnown RBP13.36□□□□□ -0.27
SNX1-214ENST00000625244 SOX11P35716 441 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 ARL4AP40617 200 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 GABRA4P48169 554 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 ZNF165P49910 485 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 JAM2P57087 298 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 FOLH1Q04609 750 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 MAMLD1Q13495 774 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 ZIC1Q15915 447 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 DPYSL2Q16555 572 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 SPPL2CQ8IUH8 684 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 BEND7Q8N7W2 519 aaPredicted RBP13.36□□□□□ -0.27
SNX1-214ENST00000625244 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 LCN9Q8WX39 176 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 PSMF1Q92530 271 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 TUBGCP2Q9BSJ2 902 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 SRMSQ9H3Y6 488 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 ZNF160Q9HCG1 818 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 BPIFA1Q9NP55 256 aa13.36□□□□□ -0.27
SNX1-214ENST00000625244 NPDC1Q9NQX5 325 aaPredicted RBP13.36□□□□□ -0.27
SNX1-214ENST00000625244 SAMSN1Q9NSI8 373 aaKnown RBP13.36□□□□□ -0.27
SNX1-214ENST00000625244 GPR39O43194 453 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 PRAMEF2O60811 474 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 SLCO2B1O94956 709 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 MT-CYBP00156 380 aaPredicted RBP13.35□□□□□ -0.27
SNX1-214ENST00000625244 CDK11BP21127 795 aaKnown RBP13.35□□□□□ -0.27
SNX1-214ENST00000625244 UGT1A4P22310 534 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 IL1R2P27930 398 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 CD86P42081 329 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 KLK7P49862 253 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 ADAM8P78325 824 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 NKG7Q16617 165 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 HSP90AA4PQ58FG1 418 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 OVCH1Q7RTY7 1134 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 DNAAF3Q8N9W5 541 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 BRSK1Q8TDC3 778 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 BRIX1Q8TDN6 353 aaKnown RBP13.35□□□□□ -0.27
SNX1-214ENST00000625244 SDCCAG3Q96C92 435 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 ARSGQ96EG1 525 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 RMDN2Q96LZ7 410 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 BPIFA3Q9BQP9 254 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 ZNF559Q9BR84 538 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 ADGRE3Q9BY15 652 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 LIME1Q9H400 295 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 SOX17Q9H6I2 414 aaPredicted RBP13.35□□□□□ -0.27
SNX1-214ENST00000625244 MRM3Q9HC36 420 aaKnown RBP13.35□□□□□ -0.27
SNX1-214ENST00000625244 ZNF711Q9Y462 761 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 DNMT3AQ9Y6K1 912 aaPredicted RBP13.35□□□□□ -0.27
SNX1-214ENST00000625244 COLEC10Q9Y6Z7 277 aa13.35□□□□□ -0.27
SNX1-214ENST00000625244 GOLGA6L19H0YKK7 550 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 AURKAO14965 403 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 EPHB6O15197 1021 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 MATN3O15232 486 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 ZNHIT1O43257 154 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 RNF8O76064 485 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 TCF4P15884 667 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 ALAS2P22557 587 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 NDUFS1P28331 727 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 SERPINB6P35237 376 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
SNX1-214ENST00000625244 KRT33BQ14525 404 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 RBBP7Q16576 425 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 COX15Q7KZN9 410 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 TRIM73Q86UV7 250 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 LRRC49Q8IUZ0 686 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 SIRT6Q8N6T7 355 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 C19orf47Q8N9M1 422 aaKnown RBP13.34□□□□□ -0.27
SNX1-214ENST00000625244 ACVR1CQ8NER5 493 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 NAT14Q8WUY8 206 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 FKBP10Q96AY3 582 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 TRIB3Q96RU7 358 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 GPR63Q9BZJ6 419 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 WDR54Q9H977 334 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 MAGEE1Q9HCI5 957 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 NLRC4Q9NPP4 1024 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 FAM8A1Q9UBU6 413 aa13.34□□□□□ -0.27
SNX1-214ENST00000625244 ZANQ9Y493 2812 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 TLN2Q9Y4G6 2542 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 TMEM191CA6NGB0 347 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 ADAM10O14672 748 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 MFSD11O43934 449 aa13.33□□□□□ -0.28
SNX1-214ENST00000625244 UGT1A9O60656 530 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms