RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 PARP15Q460N3 678 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 PRR23CQ6ZRP0 262 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 CYP2U1Q7Z449 544 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 BDH2Q9BUT1 245 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 CFHR5Q9BXR6 569 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 TRIM54Q9BYV2 358 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 OLA1Q9NTK5 396 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 FKBPLQ9UIM3 349 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZNF225Q9UK10 706 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 THSD7BQ9C0I4 1608 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 PRRG1O14668 218 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 INSIG1O15503 277 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 SLC7A4O43246 635 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 SLC22A3O75751 556 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 CLPXO76031 633 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 MATN4O95460 622 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 PRLP01236 227 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ALPIP09923 528 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 SLC11A2P49281 568 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 TPD52P55327 224 aaPredicted RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 LSM3P62310 102 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 RCAN2Q14206 197 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 BROXQ5VW32 411 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 PSAPL1Q6NUJ1 521 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 TPGS1Q6ZTW0 290 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 GLT6D1Q7Z4J2 308 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 DEPDC4Q8N2C3 294 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 DTWD1Q8N5C7 304 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 TRUB1Q8WWH5 349 aaKnown RBP13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 MYLIPQ8WY64 445 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 NSMCE2Q96MF7 247 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 COQ7Q99807 217 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 RIC8BQ9NVN3 520 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 PSME2Q9UL46 239 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 RNF112Q9ULX5 631 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 ASB1Q9Y576 335 aa13.16□□□□□ -0.3
PCDHB17P-202ENST00000623466 H3BNC9 293 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 UPK1AO00322 258 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CCRL2O00421 344 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 SEC14L2O76054 403 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 RHOBTB1O94844 696 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CPNE6O95741 557 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 FDXRP22570 491 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 ALDH4A1P30038 563 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 HTR7P34969 479 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 PIGAP37287 484 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 POLR2JP52435 117 aaKnown RBP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 DGKQP52824 942 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 RAD23AP54725 363 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 GRSF1Q12849 480 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 OXA1LQ15070 435 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 SYVN1Q86TM6 617 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CCDC117Q8IWD4 279 aaPredicted RBP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 FBXO39Q8N4B4 442 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 ABHD11Q8NFV4 315 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 FBXO30Q8TB52 745 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CCDC90BQ9GZT6 254 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 MFSD1Q9H3U5 465 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 TOR3AQ9H497 397 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 PDFQ9HBH1 243 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CLEC4EQ9ULY5 219 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 TRIM64BA6NI03 449 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 H0Y626 953 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 NIPSNAP2O75323 286 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZDHHC11BP0C7U3 371 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 LCP2Q13094 533 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 PTPRNQ16849 979 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 ZRANB3Q5FWF4 1079 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CEP78Q5JTW2 689 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 DSG4Q86SJ6 1040 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 HEATR4Q86WZ0 1026 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 PTRH1Q86Y79 214 aaKnown RBP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 ITCHQ96J02 903 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 C17orf80Q9BSJ5 609 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 FUNDC2Q9BWH2 189 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 RAD21L1Q9H4I0 556 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CARS2Q9HA77 564 aaKnown RBP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 CATSPERZQ9NTU4 200 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 AASSQ9UDR5 926 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 PCDHB9Q9Y5E1 797 aa13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.3
PCDHB17P-202ENST00000623466 TAF4O00268 1085 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 TBL1XO60907 577 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 HTR1AP08908 422 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 THRBP10828 461 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 PRKACGP22612 351 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 TMBIM6P55061 237 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 NFKB2Q00653 900 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 CRTC3Q6UUV7 619 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 SPARTQ8N0X7 666 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 CDYL2Q8N8U2 506 aa13.14□□□□□ -0.31
PCDHB17P-202ENST00000623466 FNDC5Q8NAU1 212 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms