RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 WRAP53Q9BUR4 548 aaKnown RBP17.32■□□□□ 0.36
ZNF48-206ENST00000622647 TRIM54Q9BYV2 358 aa17.32■□□□□ 0.36
ZNF48-206ENST00000622647 CCM2LQ9NUG4 571 aaPredicted RBP17.32■□□□□ 0.36
ZNF48-206ENST00000622647 ACTR3BQ9P1U1 418 aa17.32■□□□□ 0.36
ZNF48-206ENST00000622647 SLC22A14Q9Y267 594 aa17.32■□□□□ 0.36
ZNF48-206ENST00000622647 ANKRD28O15084 1053 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 LRATO95237 230 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 PDYNP01213 254 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 ATP1B2P14415 290 aaPredicted RBP17.31■□□□□ 0.36
ZNF48-206ENST00000622647 SYN1P17600 705 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 AOAHP28039 575 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 PBLDP30039 288 aaPredicted RBP17.31■□□□□ 0.36
ZNF48-206ENST00000622647 VIPR2P41587 438 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 INPP5AQ14642 412 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 GTDC1Q4AE62 458 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 SPANXN4Q5MJ08 99 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 DLEU7Q6UYE1 221 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 METTL3Q86U44 580 aaKnown RBP17.31■□□□□ 0.36
ZNF48-206ENST00000622647 ADGRG5Q8IZF4 528 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 ITFG1Q8TB96 612 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 SPPL3Q8TCT6 385 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 CLP1Q92989 425 aaKnown RBP17.31■□□□□ 0.36
ZNF48-206ENST00000622647 ISG20Q96AZ6 181 aaKnown RBP17.31■□□□□ 0.36
ZNF48-206ENST00000622647 TBCDQ9BTW9 1192 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 CPEB1Q9BZB8 566 aaKnown RBP17.31■□□□□ 0.36
ZNF48-206ENST00000622647 FAM83DQ9H4H8 585 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 RPF2Q9H7B2 306 aaKnown RBP17.31■□□□□ 0.36
ZNF48-206ENST00000622647 HEBP1Q9NRV9 189 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 COQ6Q9Y2Z9 468 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 RGS14O43566 566 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 IL10P22301 178 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 BMPR1AP36894 532 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 PREPP48147 710 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 PTCHD3Q3KNS1 767 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 LIN52Q52LA3 116 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 THEMIS2Q5TEJ8 643 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 ERMP1Q7Z2K6 904 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 NECAB2Q7Z6G3 386 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 ZUFSPQ96AP4 578 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 HEPHQ9BQS7 1158 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 VAPAQ9P0L0 249 aa17.31■□□□□ 0.36
ZNF48-206ENST00000622647 REV3LO60673 3130 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 NUP214P35658 2090 aaPredicted RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 FADS2P1A8MWK0 482 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 GSNP06396 782 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 SMIM18P0DKX4 95 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 PCNAP12004 261 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 TIMP2P16035 220 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 XPAP23025 273 aaPredicted RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 HRH2P25021 359 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 NAA20P61599 178 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 GRM2Q14416 872 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 GRIN2CQ14957 1233 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 SF1Q15637 639 aaKnown RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 NEK5Q6P3R8 708 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 ANKRD46Q86W74 232 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 C12orf40Q86WS4 652 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 ZNF641Q96N77 438 aaPredicted RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 LRTM1Q9HBL6 345 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 CLDN9O95484 217 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 CLIC3O95833 236 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 HIST1H2AGP0C0S8 130 aaPredicted RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 HLA-EP13747 358 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 HIST1H2ADP20671 130 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 VARSP26640 1264 aaKnown RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 GNPDA1P46926 289 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 BNIP2Q12982 314 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 LCN8Q6JVE9 175 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 ELMSAN1Q6PJG2 1045 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 TRIM74Q86UV6 250 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 TMEM126BQ8IUX1 230 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 HID1Q8IV36 788 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 SELENOMQ8WWX9 145 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 BIRC7Q96CA5 298 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 HIST1H2AHQ96KK5 128 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 PPP3R2Q96LZ3 170 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 TSSK3Q96PN8 268 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 HIST1H2AJQ99878 128 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 CENPKQ9BS16 269 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 H2AFJQ9BTM1 129 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 THUMPD3Q9BV44 507 aaKnown RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 DPY30Q9C005 99 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 GRIP2Q9C0E4 1043 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 IKZF5Q9H5V7 419 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 SOX17Q9H6I2 414 aaPredicted RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 EIF3LQ9Y262 564 aaKnown RBP17.3■□□□□ 0.36
ZNF48-206ENST00000622647 DLGAP4Q9Y2H0 992 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 PLXNB3Q9ULL4 1909 aa17.3■□□□□ 0.36
ZNF48-206ENST00000622647 RNF103-CHMP3A0A140T963 221 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 KANSL1LA0AUZ9 987 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 ZNF77Q15935 545 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 CCSMST1Q4G0I0 132 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 GLYATQ6IB77 296 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 EPHX4Q8IUS5 362 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 SFTPA1Q8IWL2 248 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 PHACTR4Q8IZ21 702 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 AURKBQ96GD4 344 aaPredicted RBP17.29■□□□□ 0.36
ZNF48-206ENST00000622647 MRGPRX3Q96LB0 322 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 RNF145Q96MT1 663 aa17.29■□□□□ 0.36
ZNF48-206ENST00000622647 CGREF1Q99674 301 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms