RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 CTNNBL1Q8WYA6 563 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 QKIQ96PU8 341 aaKnown RBP eCLIP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 ERP44Q9BS26 406 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 CCDC134Q9H6E4 229 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 METTL5Q9NRN9 209 aaKnown RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 PKD2L2Q9NZM6 624 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 ABI3Q9P2A4 366 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 OR12D3Q9UGF7 316 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 POLG2Q9UHN1 485 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 POMT2Q9UKY4 750 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 PNMA8BQ9ULN7 279 aaPredicted RBP5.29□□□□□ -1.56
CBWD3-215ENST00000619322 HIF3AQ9Y2N7 669 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 AP1M2Q9Y6Q5 423 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 EYSQ5T1H1 3165 aa5.29□□□□□ -1.56
CBWD3-215ENST00000619322 ASPDHA6ND91 283 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 FOXO6A8MYZ6 492 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 THAP12O43422 761 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RFPL1O75677 317 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 TGFB1P01137 390 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PRLP01236 227 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 FGGP02679 453 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 F3P13726 295 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 TRHRP34981 398 aaPredicted RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RRADP55042 308 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SPIDRQ14159 915 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CCDC6Q16204 474 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 LRRC73Q5JTD7 316 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 KCTD11Q693B1 232 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 Q6ZS92 163 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 NANOGNBQ7Z5D8 188 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 MILR1Q7Z6M3 343 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 IPMKQ8NFU5 416 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 ZNF473Q8WTR7 871 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PGM2Q96G03 612 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CCT8L2Q96SF2 557 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 AP1M1Q9BXS5 423 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 DDX47Q9H0S4 455 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 STN1Q9H668 368 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CYP4F12Q9HCS2 524 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PCDH12Q9NPG4 1184 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PRDM8Q9NQV8 689 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CORO1CQ9ULV4 474 aaPredicted RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SRPK3Q9UPE1 567 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SZT2Q5T011 3432 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 MAGEA13PA6NCF6 341 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PRPF4O43172 522 aaKnown RBP eCLIP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RAD1O60671 282 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 COMTP21964 271 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SLC5A2P31639 672 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 HMGCLP35914 325 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SPINT3P49223 89 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CSNK1EP49674 416 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 VPS41P49754 854 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 BOP1Q14137 746 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PCOLCEQ15113 449 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 FBXL19-AS1Q494R0 122 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 KCTD21Q4G0X4 260 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 NLRP9Q7RTR0 991 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CPNE8Q86YQ8 564 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 JAMLQ86YT9 394 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CARNMT1Q8N4J0 409 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 OR2L2Q8NH16 312 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CLEC4CQ8WTT0 213 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 OR1E3Q8WZA6 343 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SCMH1Q96GD3 660 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RBM41Q96IZ5 413 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RUNDC3BQ96NL0 473 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 NAP1L3Q99457 506 aaPredicted RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 MENTQ9BUN1 341 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CDC42EP4Q9H3Q1 356 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 C7orf69Q9H7B7 122 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 NT5DC2Q9H857 520 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CD93Q9NPY3 652 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SATB2Q9UPW6 733 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PLAAQ9Y263 795 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 A0A1B0GVC2 190 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 TCRBV7S2A1N4TA0A589 114 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 BOLA2-SMG1P6H3BVE0 249 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 B4GAT1O43505 415 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CEP104O60308 925 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PFDN1O60925 122 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RNASEH2AO75792 299 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RASSF9O75901 435 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 FAM155BO75949 473 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 HOXD4P09016 255 aaPredicted RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 PIM1P11309 404 aaPredicted RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 TNFAIP3P21580 790 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 CD96P40200 585 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 SKIV2L2P42285 1042 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 WIPI1Q5MNZ9 446 aaPredicted RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 DCAF12Q5T6F0 453 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 AADACL2Q6P093 401 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 RNF165Q6ZSG1 346 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 MAATS1Q7Z4T9 603 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 LCA5Q86VQ0 697 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 MMAAQ8IVH4 418 aaKnown RBP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 FBXO39Q8N4B4 442 aa5.28□□□□□ -1.56
CBWD3-215ENST00000619322 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.28□□□□□ -1.56
CBWD3-215ENST00000619322 EID2Q8N6I1 236 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms