RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 SIX3O95343 332 aaPredicted RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 ACTR1BP42025 376 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 ACTR1AP61163 376 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 INAQ16352 499 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 KIAA2013Q8IYS2 634 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 TMEM130Q8N3G9 435 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 UGT2B17O75795 530 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 SEMA3AQ14563 771 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 CYS1Q717R9 158 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 HIPK1Q86Z02 1210 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 ITGB1P05556 798 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 F7P08709 466 aaPredicted RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 HOXB2P14652 356 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 PCYT1AP49585 367 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 MTAPQ13126 283 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 TRIM16LQ309B1 348 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 ZNF805Q5CZA5 627 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 NXPE1Q8N323 547 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 RASSF5Q8WWW0 418 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 OSER1Q9NX31 292 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 SUCOQ9UBS9 1254 aaKnown RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 POLR1DQ9Y2S0 133 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 AGRPO00253 132 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 CDC7O00311 574 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 TGM5O43548 720 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 POP7O75817 140 aaKnown RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 FABP3P05413 133 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 FAM174BQ3ZCQ3 159 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 PRAMEF14Q5SWL7 426 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 GPRC6AQ5T6X5 926 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 PRAMEF13Q5VWM6 474 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 NAPRTQ6XQN6 538 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 PIK3C3Q8NEB9 887 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 TEX47Q8TBZ9 253 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 RTP4Q96DX8 246 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 CASD1Q96PB1 797 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 SMAD5Q99717 465 aaKnown RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 ZNF282Q9UDV7 671 aaPredicted RBP12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 MAP4K5Q9Y4K4 846 aa12.03□□□□□ -0.48
CYFIP1-207ENST00000617556 BHMG1C9JSJ3 638 aaPredicted RBP12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 STX16-NPEPL1H3BU86 382 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 STX16O14662 325 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 SLC25A12O75746 678 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 USP46P62068 366 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 PRR5P85299 388 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 GRM2Q14416 872 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 DGUOKQ16854 277 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 ARMCX4Q5H9R4 360 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 MBOAT1Q6ZNC8 495 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 LUZP2Q86TE4 346 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 TCEAL8Q8IYN2 117 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 XAGE5Q8WWM1 108 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 BTBD1Q9H0C5 482 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 EQTNQ9NQ60 294 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 PRDM8Q9NQV8 689 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 ELOVL2Q9NXB9 296 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 FBXW2Q9UKT8 454 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 LYVE1Q9Y5Y7 322 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 FYNP06241 537 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 ALPPL2P10696 532 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 NT5EP21589 574 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 FEN1P39748 380 aaKnown RBP12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 DNAJB13P59910 316 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 WDR6Q9NNW5 1121 aaKnown RBP12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 CALML5Q9NZT1 146 aa12.02□□□□□ -0.48
CYFIP1-207ENST00000617556 KMOO15229 486 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 NBNO60934 754 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 ADAMTS4O75173 837 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 LRRC32Q14392 662 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 LARS2Q15031 903 aaKnown RBP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 POMGNT2Q8NAT1 580 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 ZNF317Q96PQ6 595 aaPredicted RBP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 MAT2BQ9NZL9 334 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 VPS29Q9UBQ0 182 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 PSAT1Q9Y617 370 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 C9JVG2 144 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 PRR23D1E9PI22 279 aaPredicted RBP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 TRIM24O15164 1050 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 B3GALT2O43825 422 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 UGT2B11O75310 529 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 TNFP01375 233 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 PRR23D2P0DMB1 279 aaPredicted RBP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 PRPS1L1P21108 318 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 NR1H2P55055 460 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 ITGA1P56199 1179 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 SLBPQ14493 270 aaKnown RBP eCLIP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 FAM92BQ6ZTR7 304 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 WDR36Q8NI36 951 aaKnown RBP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 RAB7BQ96AH8 199 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 CDK15Q96Q40 435 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 MTERF1Q99551 399 aaKnown RBP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 DUSP26Q9BV47 211 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 CCNB1IP1Q9NPC3 277 aa12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 DDX60LQ5H9U9 1706 aaKnown RBP12.02□□□□□ -0.49
CYFIP1-207ENST00000617556 A8MUI8 341 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms