RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 STON1Q9Y6Q2 735 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 LCHNA4D1U4 455 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 PRR5-ARHGAP8B1AHC4 643 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM155AB1AL88 458 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM20BO75063 409 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 UBXN7O94888 489 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 AGXTP21549 392 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ARHGAP8P85298 464 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC9A5Q14940 896 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 DPY19L1Q2PZI1 675 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 DGKKQ5KSL6 1271 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 MPP7Q5T2T1 576 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 KIAA1161Q6NSJ0 714 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 GK5Q6ZS86 529 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 HTR3DQ70Z44 454 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 NUDT13Q86X67 352 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 CLDN19Q8N6F1 224 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 LINC01465Q8N7H1 131 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 OR2T3Q8NH03 318 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 FOXJ1Q92949 421 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 MRGPRX2Q96LB1 330 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 RSPH9Q9H1X1 276 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 C12orf65Q9H3J6 166 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 EQTNQ9NQ60 294 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ACSS2Q9NR19 701 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 USE1Q9NZ43 259 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 COQ6Q9Y2Z9 468 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 CHURC1-FNTBB4DL54 471 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 C9J4A7 227 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 VEGFDO43915 354 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 OAS1P00973 400 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 PRKCHP24723 683 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ETV3P41162 512 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 IRF9Q00978 393 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 NCEH1Q6PIU2 408 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 LIX1Q8N485 282 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 DEFB119Q8N690 84 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 CNTD1Q8N815 330 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM145Q8NBT3 493 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF248Q8NDW4 579 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 DENND1AQ8TEH3 1009 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 FGF13Q92913 245 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 GPR174Q9BXC1 333 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 RERGLQ9H628 205 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC17A6Q9P2U8 582 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 OR5K4A6NMS3 321 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 GRXCR1A8MXD5 290 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 CXorf49A8MYA2 514 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ATP6V1G2O95670 118 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 PIM1P11309 404 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ITPKBP27987 946 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SERPINB1P30740 379 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 RPS14P62263 151 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 NFKB2Q00653 900 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 OLIG2Q13516 323 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 UAP1L1Q3KQV9 507 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 GCNT6Q5T4J0 391 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 LUZP2Q86TE4 346 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF781Q8N8C0 355 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SETD7Q8WTS6 366 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SORCS1Q8WY21 1168 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 CALML5Q9NZT1 146 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 SAMD4AQ9UPU9 718 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 PCDHB11Q9Y5F2 797 aa9.26□□□□□ -0.93
CLTCL1-208ENST00000615606 CAPN8A6NHC0 703 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MAGEA10P43363 369 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 BDKRB1P46663 353 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC13A2Q13183 592 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 LARS2Q15031 903 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SVOPQ8N4V2 548 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MAPK15Q8TD08 544 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 XAGE5Q8WWM1 108 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 TEFMQ96QE5 360 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC29A3Q9BZD2 475 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 OXSMQ9NWU1 459 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 TPRKBQ9Y3C4 175 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MATN4O95460 622 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 RPL10P27635 214 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MRPS15P82914 257 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 NR1D2Q14995 579 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 TCEAL5Q5H9L2 206 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF605Q86T29 641 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 HEATR4Q86WZ0 1026 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 NATD1Q8N6N6 113 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ZMIZ2Q8NF64 920 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC9A6Q92581 669 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 RGMAQ96B86 450 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ZBED6CLQ96FA7 236 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ANKRD27Q96NW4 1050 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 NPAS2Q99743 824 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF576Q9H609 170 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MAT2BQ9NZL9 334 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 TAC3Q9UHF0 121 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 USP3Q9Y6I4 520 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 DNAJA2O60884 412 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 IL6P05231 212 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 PSMD4P55036 377 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 CDC42P60953 191 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 GSTM4Q03013 218 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms