RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 CDYL2Q8N8U2 506 aa8.58□□□□□ -1.04
PDE6A-204ENST00000613228 TP53INP1Q96A56 240 aa8.58□□□□□ -1.04
PDE6A-204ENST00000613228 CDKN2AIPNLQ96HQ2 116 aa8.58□□□□□ -1.04
PDE6A-204ENST00000613228 LRTM1Q9HBL6 345 aa8.58□□□□□ -1.04
PDE6A-204ENST00000613228 ABCB8Q9NUT2 735 aa8.58□□□□□ -1.04
PDE6A-204ENST00000613228 EHD3Q9NZN3 535 aa8.58□□□□□ -1.04
PDE6A-204ENST00000613228 H2AFY2Q9P0M6 372 aaPredicted RBP8.58□□□□□ -1.04
PDE6A-204ENST00000613228 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
PDE6A-204ENST00000613228 ZNF840PA6NDX5 716 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PRR5-ARHGAP8B1AHC4 643 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 LEFTY2O00292 366 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 NPC1O15118 1278 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 MAGEB3O15480 346 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PEX1O43933 1283 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TMCC2O75069 709 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 HNRNPLP14866 589 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 EPHA3P29320 983 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 FOXN2P32314 431 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 POLR2JP52435 117 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TAS2R39P59534 338 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 RPL38P63173 70 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ARHGAP8P85298 464 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 SLC25A3Q00325 362 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 DPY19L1Q2PZI1 675 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 DET1Q7L5Y6 550 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 CILP2Q8IUL8 1156 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 NETO2Q8NC67 525 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 AIF1LQ9BQI0 150 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ARL5AQ9Y689 179 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 COLEC10Q9Y6Z7 277 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 A0A0J9YYE9 177 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ITM2AO43736 263 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 APOL3O95236 402 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ABCB1P08183 1280 aaPredicted RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ZNF806P0C7X5 589 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PEX2P28328 305 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 RPL34P49207 117 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 STC1P52823 247 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 AP1S2P56377 157 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TMEM135Q86UB9 458 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TCEAL8Q8IYN2 117 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 GLIS1Q8NBF1 620 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PIK3C3Q8NEB9 887 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 OR8H1Q8NGG4 311 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ZNF420Q8TAQ5 688 aaPredicted RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PHOSPHO2Q8TCD6 241 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 RCN3Q96D15 328 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PSKH2Q96QS6 385 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 MND1Q9BWT6 205 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TRIT1Q9H3H1 467 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 WDR6Q9NNW5 1121 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 MAN1C1Q9NR34 630 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 SH3D21A4FU49 640 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 CXorf49A8MYA2 514 aaPredicted RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 J3KR12 359 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 LINC00032P0C843 101 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TIGD2Q4W5G0 525 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 MBLAC2Q68D91 279 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 DOK6Q6PKX4 331 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TPRG1Q6ZUI0 275 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 GPR180Q86V85 440 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 C8orf59Q8N0T1 100 aaPredicted RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 GSTCDQ8NEC7 633 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 AP2M1Q96CW1 435 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 RNF145Q96MT1 663 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 NMUR2Q9GZQ4 415 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 KATNBL1Q9H079 304 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 NUAK2Q9H093 628 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 NEK6Q9HC98 313 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 CHMP1AQ9HD42 196 aaPredicted RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 EXOSC4Q9NPD3 245 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TMEM9Q9P0T7 183 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 SH3BP4Q9P0V3 963 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PCDHGC4Q9Y5F7 938 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TCRBV5S1A1TA0A578 114 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 FAM220BPB1ANY3 271 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 H3BM21 787 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ZNF682O95780 498 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 IL6P05231 212 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 ATF6P18850 670 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 CLK3P49761 638 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TRIM32Q13049 653 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 NFE2L1Q14494 772 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 DLG2Q15700 870 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 REP15Q6BDI9 236 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 C22orf39Q6P5X5 142 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 CNSTQ6PJW8 725 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 LINGO4Q6UY18 593 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 CHSY3Q70JA7 882 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 DENND6AQ8IWF6 608 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TBC1D21Q8IYX1 336 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 HDAC2Q92769 488 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 CDCA3Q99618 268 aaPredicted RBP8.57□□□□□ -1.04
PDE6A-204ENST00000613228 TDP1Q9NUW8 608 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 USE1Q9NZ43 259 aa8.57□□□□□ -1.04
PDE6A-204ENST00000613228 LCHNA4D1U4 455 aa8.56□□□□□ -1.04
PDE6A-204ENST00000613228 ANKRD66B4E2M5 251 aa8.56□□□□□ -1.04
PDE6A-204ENST00000613228 K7EPI3 171 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms