RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 CDC7O00311 574 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 CKMT2P17540 419 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 ERVK-8P63133 956 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 SLC18A2Q05940 514 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 RPS27LQ71UM5 84 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 ZNF280BQ86YH2 543 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 OR2AP1Q8NGE2 309 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 KAT2AQ92830 837 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 RAB26Q9ULW5 256 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 RUVBL1Q9Y265 456 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 A0A0G2JN53 185 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 ABHD14A-ACY1A0A1B0GW23 586 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 MTMR11A4FU01 709 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 SLC25A12O75746 678 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 CLDN7O95471 211 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 LAMP2P13473 410 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 POU2F1P14859 743 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 C4BPBP20851 252 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 PRKCHP24723 683 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 CREB5Q02930 508 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 C2orf27AQ580R0 203 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 ARSIQ5FYB1 569 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 MBLAC2Q68D91 279 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 LMLNQ96KR4 655 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 COQ10BQ9H8M1 238 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 TESMINQ9Y4I5 508 aa12.3□□□□□ -0.44
TNFAIP3-206ENST00000612899 FAM72CH0Y354 149 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 PI15O43692 258 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 XRCC1P18887 633 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 NT5EP21589 574 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 PTPN5P54829 565 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CASP9P55211 416 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 RGS8P57771 180 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 SCRN3Q0VDG4 424 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 TAF13Q15543 124 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 FAM72AQ5TYM5 149 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 FAM72DQ6L9T8 149 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 FAM72BQ86X60 149 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 RASSF5Q8WWW0 418 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 EBF3Q9H4W6 596 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CMTM6Q9NX76 183 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 SAP18O00422 153 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CXCR6O00574 342 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 UGT2B11O75310 529 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 BEST1O76090 585 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 MTHFD1P11586 935 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 HOXB6P17509 224 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 RYKP34925 604 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CDH12P55289 794 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 ATP13A5Q4VNC0 1218 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 ZNF730Q6ZMV8 503 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 AHSA2Q719I0 299 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 UTS2BQ765I0 119 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CAND1Q86VP6 1230 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 GLB1L3Q8NCI6 653 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 ZMIZ2Q8NF64 920 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 NAT14Q8WUY8 206 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 C1GALT1C1Q96EU7 318 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 TMEM209Q96SK2 561 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 MRPL39Q9NYK5 338 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 SUCOQ9UBS9 1254 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 SSR3Q9UNL2 185 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 KERAO60938 352 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CCNDBP1O95273 360 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 SAGP10523 405 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 GATMP50440 423 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 HEPACAMQ14CZ8 416 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 TAF8Q7Z7C8 310 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 ZDHHC21Q8IVQ6 265 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 GPR65Q8IYL9 337 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 PHTF2Q8N3S3 785 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 OR9I1Q8NGQ6 314 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 ZNF461Q8TAF7 563 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 VRTNQ9H8Y1 702 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 DNAJB4Q9UDY4 337 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 CYTH4Q9UIA0 394 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 COLEC10Q9Y6Z7 277 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 HAS3O00219 553 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 PSMD11O00231 422 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 WNT9AO14904 365 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 SNAPC1Q16533 368 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 FAM180AQ6UWF9 173 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 FRMD7Q6ZUT3 714 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 AMZ2Q86W34 360 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 FAM129CQ86XR2 697 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 GALNT6Q8NCL4 622 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 ZCCHC10Q8TBK6 192 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 DNASE1L2Q92874 299 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 C12orf66Q96MD2 445 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 C11orf84Q9BUA3 381 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 RIOK2Q9BVS4 552 aaKnown RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 PRDM8Q9NQV8 689 aa12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 IFT80Q9P2H3 777 aaPredicted RBP12.29□□□□□ -0.44
TNFAIP3-206ENST00000612899 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms