RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RBM41Q96IZ5 413 aaKnown RBP22.65■■□□□ 1.22
MMP28-203ENST00000612672 HGH1Q9BTY7 390 aa22.65■■□□□ 1.22
MMP28-203ENST00000612672 FICDQ9BVA6 458 aa22.65■■□□□ 1.22
MMP28-203ENST00000612672 C10orf88Q9H8K7 445 aa22.65■■□□□ 1.22
MMP28-203ENST00000612672 ACTR10Q9NZ32 417 aa22.65■■□□□ 1.22
MMP28-203ENST00000612672 DHCR7Q9UBM7 475 aaKnown RBP22.65■■□□□ 1.22
MMP28-203ENST00000612672 ICKQ9UPZ9 632 aa22.65■■□□□ 1.22
MMP28-203ENST00000612672 F8P00451 2351 aa22.65■■□□□ 1.22
MMP28-203ENST00000612672 CCDC66A2RUB6 948 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 CCL22O00626 93 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 CST8O60676 142 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 AGXTP21549 392 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 PRKG2Q13237 762 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 MSLNQ13421 630 aaPredicted RBP22.64■■□□□ 1.21
MMP28-203ENST00000612672 HIF1AQ16665 826 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 MRPL14Q6P1L8 145 aaKnown RBP22.64■■□□□ 1.21
MMP28-203ENST00000612672 LUZP1Q86V48 1076 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 C19orf47Q8N9M1 422 aaKnown RBP22.64■■□□□ 1.21
MMP28-203ENST00000612672 CLEC1AQ8NC01 280 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 ST6GALNAC3Q8NDV1 305 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 FLVCR1-AS1Q8TAF5 88 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 FER1L6-AS2Q96M78 137 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 GBP4Q96PP9 640 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 APOL2Q9BQE5 337 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 TFB2MQ9H5Q4 396 aaKnown RBP22.64■■□□□ 1.21
MMP28-203ENST00000612672 SLC22A11Q9NSA0 550 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 LCMT1Q9UIC8 334 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 NOVA2Q9UNW9 492 aaKnown RBP22.64■■□□□ 1.21
MMP28-203ENST00000612672 HEBP2Q9Y5Z4 205 aa22.64■■□□□ 1.21
MMP28-203ENST00000612672 ZFHX3Q15911 3703 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 ARHGAP10A1A4S6 786 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 LRRTM2O43300 516 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 MBD3O95983 291 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 PRSS56P0CW18 603 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 FOLR3P41439 243 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 CDKN1CP49918 316 aaPredicted RBP22.63■■□□□ 1.21
MMP28-203ENST00000612672 MPP3Q13368 585 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 ELOAQ14241 798 aaKnown RBP22.63■■□□□ 1.21
MMP28-203ENST00000612672 LRRC38Q5VT99 294 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 KAZNQ674X7 775 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 RHBDD2Q6NTF9 364 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 SPESP1Q6UW49 350 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 PID1Q7Z2X4 250 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 KCNMB4Q86W47 210 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 OR2Y1Q8NGV0 311 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 MARVELD3Q96A59 401 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 QKIQ96PU8 341 aaKnown RBP eCLIP22.63■■□□□ 1.21
MMP28-203ENST00000612672 CCM2Q9BSQ5 444 aa22.63■■□□□ 1.21
MMP28-203ENST00000612672 UNKQ9C0B0 810 aaKnown RBP22.63■■□□□ 1.21
MMP28-203ENST00000612672 KLHL33A6NCF5 533 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 ALPPP05187 535 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 TPBGLP0DKB5 382 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 ITGAXP20702 1163 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 NR2C2P49116 596 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 SOX8P57073 446 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 UBASH3AP57075 661 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 TMPRSS15P98073 1019 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 BOP1Q14137 746 aaKnown RBP22.62■■□□□ 1.21
MMP28-203ENST00000612672 AMIGO1Q86WK6 493 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 NXPE1Q8N323 547 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 IP6K3Q96PC2 410 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 SPHK1Q9NYA1 384 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 SRPK3Q9UPE1 567 aa22.62■■□□□ 1.21
MMP28-203ENST00000612672 C2orf74A8MZ97 194 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 OR2B3O76000 313 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 HBQ1P09105 142 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 UGT2B7P16662 529 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 ADRA1AP35348 466 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 TAF1AQ15573 450 aaPredicted RBP22.61■■□□□ 1.21
MMP28-203ENST00000612672 ZADH2Q8N4Q0 377 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 OR2A14Q96R47 310 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 FSD1LQ9BXM9 530 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 SLC6A20Q9NP91 592 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 IFT80Q9P2H3 777 aaPredicted RBP22.61■■□□□ 1.21
MMP28-203ENST00000612672 RSPH14Q9UHP6 348 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 CRLS1Q9UJA2 301 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 OSGIN2Q9Y236 505 aa22.61■■□□□ 1.21
MMP28-203ENST00000612672 PEX12O00623 359 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 ZG16O60844 167 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 PYGMP11217 842 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 ATP1B2P14415 290 aaPredicted RBP22.6■■□□□ 1.21
MMP28-203ENST00000612672 ELAVL4P26378 380 aaKnown RBP22.6■■□□□ 1.21
MMP28-203ENST00000612672 ARHGAP25P42331 645 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 ZNF140P52738 457 aaPredicted RBP22.6■■□□□ 1.21
MMP28-203ENST00000612672 ZRSR2Q15696 482 aaKnown RBP22.6■■□□□ 1.21
MMP28-203ENST00000612672 GPR135Q8IZ08 494 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 ZNF655Q8N720 491 aaPredicted RBP22.6■■□□□ 1.21
MMP28-203ENST00000612672 OR5AR1Q8NGP9 310 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 DCUN1D1Q96GG9 259 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 WDR77Q9BQA1 342 aaPredicted RBP22.6■■□□□ 1.21
MMP28-203ENST00000612672 GOLPH3Q9H4A6 298 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 SPTLC3Q9NUV7 552 aa22.6■■□□□ 1.21
MMP28-203ENST00000612672 GPN3Q9UHW5 284 aaPredicted RBP22.6■■□□□ 1.21
MMP28-203ENST00000612672 HIVEP1P15822 2718 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 IGLV3-16A0A075B6K0 115 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 C17orf113A0A1B0GUU1 675 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 COMTP21964 271 aa22.59■■□□□ 1.21
MMP28-203ENST00000612672 PEBP1P30086 187 aaKnown RBP22.59■■□□□ 1.21
MMP28-203ENST00000612672 TNNT3P45378 269 aaPredicted RBP22.59■■□□□ 1.21
MMP28-203ENST00000612672 GCGRP47871 477 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms