RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CLEC14AQ86T13 490 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 KCNMB4Q86W47 210 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 NRROSQ86YC3 692 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CRLF3Q8IUI8 442 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 CNTN4Q8IWV2 1026 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 KIF2BQ8N4N8 673 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ARL10Q8N8L6 244 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 OR6C4Q8NGE1 309 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 OR6Y1Q8NGX8 325 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 OR6P1Q8NGX9 317 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 OR4L1Q8NH43 312 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 HDAC10Q969S8 669 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 UTP4Q969X6 686 aaKnown RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 PTCD3Q96EY7 689 aaKnown RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 DCUN1D1Q96GG9 259 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ZNF778Q96MU6 729 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 TTC1Q99614 292 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 COPS8Q99627 209 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 TIMM29Q9BSF4 260 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 DPEP2Q9H4A9 486 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 TREX1Q9NSU2 369 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 C20orf96Q9NUD7 363 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-217ENST00000611848 ZDHHC3Q9NYG2 299 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 TAAR2Q9P1P5 351 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 SLC2A6Q9UGQ3 507 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 HAO1Q9UJM8 370 aa8.66□□□□□ -1.02
SMAD4-217ENST00000611848 IGLV3-16A0A075B6K0 115 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 LY6G6EA0A0G2JKS1 128 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 CCDC162PA2VCL2 907 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 EME2A4GXA9 379 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-217ENST00000611848 KLHL33A6NCF5 533 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 TRIM16O95361 564 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 GOT2P00505 430 aaKnown RBP8.65□□□□□ -1.02
SMAD4-217ENST00000611848 FTH1P19P0C7X4 201 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 ACP5P13686 325 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 ATP1B2P14415 290 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-217ENST00000611848 VCLP18206 1134 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 PAMP19021 973 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 ACRV1P26436 265 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 PTPN4P29074 926 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 CA5AP35218 305 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 ACADVLP49748 655 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 PCLAFQ15004 111 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 NR0B2Q15466 257 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 AARS2Q5JTZ9 985 aaKnown RBP8.65□□□□□ -1.02
SMAD4-217ENST00000611848 SLC30A9Q6PML9 568 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 TMEM220Q6QAJ8 160 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 CERS6Q6ZMG9 384 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 SERPINA9Q86WD7 417 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 TRAPPC5Q8IUR0 188 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 ZNF547Q8IVP9 402 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 SLC35F3Q8IY50 421 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 RASGEF1AQ8N9B8 481 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 GPR156Q8NFN8 814 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 NAT6Q93015 286 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 RAB3IPQ96QF0 476 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-217ENST00000611848 SIKE1Q9BRV8 207 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 C20orf27Q9GZN8 174 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 FAM96AQ9H5X1 160 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 SPATS2LQ9NUQ6 558 aaKnown RBP8.65□□□□□ -1.02
SMAD4-217ENST00000611848 TOR4AQ9NXH8 423 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 TMEM216Q9P0N5 145 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 GULP1Q9UBP9 304 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 PRKAB1Q9Y478 270 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 PLEKHM1Q9Y4G2 1056 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 PCYT1BQ9Y5K3 369 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-217ENST00000611848 U3KQA8 63 aa8.65□□□□□ -1.02
SMAD4-217ENST00000611848 OR51F1A6NGY5 319 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 OR5K4A6NMS3 321 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 QSOX1O00391 747 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 NOBOXO60393 691 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 RFPL3O75679 317 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 WFS1O76024 890 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 DKK1O94907 266 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 HAUS5O94927 633 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 CBX6O95503 412 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 SERPINE1P05121 402 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 GP1BAP07359 652 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 SLC2A4P14672 509 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 ZNF7P17097 686 aaPredicted RBP8.65□□□□□ -1.03
SMAD4-217ENST00000611848 GRK2P25098 689 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 SERPINB3P29508 390 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 NSG1P42857 185 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 ARCN1P48444 511 aaKnown RBP8.65□□□□□ -1.03
SMAD4-217ENST00000611848 CDKN1CP49918 316 aaPredicted RBP8.65□□□□□ -1.03
SMAD4-217ENST00000611848 CTSCP53634 463 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 B4GALNT1Q00973 533 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 E2F1Q01094 437 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 BCL7AQ4VC05 210 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 KIAA0930Q6ICG6 404 aaPredicted RBP8.65□□□□□ -1.03
SMAD4-217ENST00000611848 CRTC3Q6UUV7 619 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 C11orf96Q7Z7L8 435 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 SLCO6A1Q86UG4 719 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 LCA5Q86VQ0 697 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 AMZ2Q86W34 360 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 PIANPQ8IYJ0 282 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 ADAMTS14Q8WXS8 1223 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 SGF29Q96ES7 293 aa8.65□□□□□ -1.03
SMAD4-217ENST00000611848 NSL1Q96IY1 281 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms