RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FAM110BQ8TC76 370 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 PHOSPHO2Q8TCD6 241 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ASB11Q8WXH4 323 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ELMO1Q92556 727 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ZNF707Q96C28 371 aaPredicted RBP13.32□□□□□ -0.28
NEK3-205ENST00000610828 PYCR2Q96C36 320 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 KCTD14Q9BQ13 255 aaPredicted RBP13.32□□□□□ -0.28
NEK3-205ENST00000610828 NANOGQ9H9S0 305 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ACTR3BQ9P1U1 418 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 RAB26Q9ULW5 256 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 EIF3LQ9Y262 564 aaKnown RBP13.32□□□□□ -0.28
NEK3-205ENST00000610828 AP4B1Q9Y6B7 739 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 DYTNA2CJ06 578 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 AQP12BA6NM10 295 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 FADS2P1A8MWK0 482 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 MANBAO00462 879 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ANKRD28O15084 1053 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 CAPNS1P04632 268 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 ADH5P11766 374 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 DGKQP52824 942 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 PLIN5Q00G26 463 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 GBX1Q14549 363 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 INPP5AQ14642 412 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 LCN8Q6JVE9 175 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 C12orf40Q86WS4 652 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 AQP12AQ8IXF9 295 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 RGL4Q8IZJ4 473 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 CELF5Q8N6W0 485 aaKnown RBP13.32□□□□□ -0.28
NEK3-205ENST00000610828 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 PIF1Q9H611 641 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 PDP2Q9P2J9 529 aa13.32□□□□□ -0.28
NEK3-205ENST00000610828 DHRS12A0PJE2 317 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 C16orf96A6NNT2 1141 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 DENRO43583 198 aaKnown RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 SEC22BO75396 215 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 WDR47O94967 919 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 MTHFD1P11586 935 aaKnown RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 TCF3P15923 654 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 EPORP19235 508 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 JAK1P23458 1154 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 PSMA4P25789 261 aaKnown RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 VIPR2P41587 438 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 GNPDA1P46926 289 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 DCDC1P59894 354 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 ST8SIA6P61647 398 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 MAD2L1Q13257 205 aaPredicted RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 ZXDCQ2QGD7 858 aaPredicted RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 ZNF284Q2VY69 593 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 PLA2G4EQ3MJ16 856 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 SPATS1Q496A3 300 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 CDKL4Q5MAI5 379 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 TBCELQ5QJ74 424 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 PLEKHS1Q5SXH7 462 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 HENMT1Q5T8I9 393 aaKnown RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 RNF220Q5VTB9 566 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 TRIM46Q7Z4K8 759 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 PPM1MQ96MI6 270 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 P2RY13Q9BPV8 354 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 ZSCAN5AQ9BUG6 496 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 COQ10BQ9H8M1 238 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 CCM2LQ9NUG4 571 aaPredicted RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 FBXO10Q9UK96 956 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 TSPAN11A1L157 253 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 KPNA3O00505 521 aaPredicted RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 KPNA5O15131 536 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 NPPAP01160 153 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 KRT6AP02538 564 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 KRT6BP04259 564 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 ELFN1P0C7U0 828 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 MPC1LP0DKB6 136 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 NCK1P16333 377 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 ZNF26P17031 533 aaPredicted RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 CYP2A7P20853 494 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 VARSP26640 1264 aaKnown RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 GGT5P36269 586 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 KRT6CP48668 564 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 CHN2P52757 468 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 CDKL1Q00532 357 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 GRIN2CQ14957 1233 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 PTCHD3Q3KNS1 767 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 SLC44A4Q53GD3 710 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 C6orf52Q5T4I8 152 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 HMBOX1Q6NT76 420 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 LRRC70Q7Z2Q7 622 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 HID1Q8IV36 788 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 TCAIMQ8N3R3 496 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 DPP10Q8N608 796 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 TRAM1L1Q8N609 369 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 C12orf76Q8N812 135 aaPredicted RBP13.31□□□□□ -0.28
NEK3-205ENST00000610828 PHC3Q8NDX5 983 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 ASZ1Q8WWH4 475 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 USP7Q93009 1102 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 CNBD2Q96M20 576 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 CIB1Q99828 191 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 LRTM1Q9HBL6 345 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 ARMC1Q9NVT9 282 aa13.31□□□□□ -0.28
NEK3-205ENST00000610828 C15orf38-AP3S2A0A0A6YYH1 394 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 C5orf67F2Z3F1 127 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 GFYI3L273 518 aa13.3□□□□□ -0.28
NEK3-205ENST00000610828 INPP4BO15327 924 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms