RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ARMC6Q6NXE6 501 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 OOSP2Q86WS3 158 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 DCUN1D3Q8IWE4 304 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 RAB42Q8N4Z0 105 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 OR5AR1Q8NGP9 310 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 ZDHHC12Q96GR4 267 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 ATXN7L3BQ96GX2 97 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 VPS39Q96JC1 886 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 ELMO2Q96JJ3 720 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 NUDT22Q9BRQ3 303 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 HGH1Q9BTY7 390 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 AKAP7Q9P0M2 348 aaPredicted RBP13.88□□□□□ -0.19
CTSA-219ENST00000607841 TDRKHQ9Y2W6 561 aaKnown RBP13.88□□□□□ -0.19
CTSA-219ENST00000607841 MSRB2Q9Y3D2 182 aa13.88□□□□□ -0.19
CTSA-219ENST00000607841 FAM95CA0A1B0GW59 222 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 FAM149AA5PLN7 773 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 TOP3BO95985 862 aaKnown RBP13.87□□□□□ -0.19
CTSA-219ENST00000607841 C1QAP02745 245 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 MPC1LP0DKB6 136 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 FDXRP22570 491 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 CCKBRP32239 447 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 SHMT2P34897 504 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 LIMK2P53671 638 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 PMS2P54278 862 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 CDKN2DP55273 166 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 CLDN6P56747 220 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 ZFP36L1Q07352 338 aaKnown RBP13.87□□□□□ -0.19
CTSA-219ENST00000607841 PRKAA1Q13131 559 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 TRA2AQ13595 282 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTSA-219ENST00000607841 CCNI2Q6ZMN8 369 aaPredicted RBP13.87□□□□□ -0.19
CTSA-219ENST00000607841 AMIGO1Q86WK6 493 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 CPNE9Q8IYJ1 553 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 OR4E2Q8NGC2 313 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 OR52E1Q8NGJ3 308 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 GIMAP7Q8NHV1 300 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 RAD51AP1Q96B01 352 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 TSPAN17Q96FV3 270 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 RBBP8Q99708 897 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 SLC30A3Q99726 388 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 FUT8Q9BYC5 575 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 RAB33BQ9H082 229 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 SRMSQ9H3Y6 488 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 ACSS3Q9H6R3 686 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 ANKZF1Q9H8Y5 726 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 SYTL2Q9HCH5 934 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 HRASLS2Q9NWW9 162 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 EPHA6Q9UF33 1036 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 KLK13Q9UKR3 277 aa13.87□□□□□ -0.19
CTSA-219ENST00000607841 CNOT1A5YKK6 2376 aaKnown RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 A0A087WUV0 522 aaPredicted RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 OR5K3A6NET4 321 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 MATN2O00339 956 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 CASC3O15234 703 aaKnown RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 CAPN5O15484 640 aaPredicted RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 PIAS1O75925 651 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 MATN4O95460 622 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 C1orf105O95561 183 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 CATP04040 527 aaKnown RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 HOXB3P14651 431 aaPredicted RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 SAT1P21673 171 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 CSF2RBP32927 897 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 IL2P60568 153 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 POU4F1Q01851 419 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 CFHR1Q03591 330 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 EIF3IQ13347 325 aaKnown RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 PHF19Q5T6S3 580 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 PAQR3Q6TCH7 311 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 SLITRK4Q8IW52 837 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 MYO1HQ8N1T3 1032 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 JPH3Q8WXH2 748 aaPredicted RBP13.86□□□□□ -0.19
CTSA-219ENST00000607841 RSC1A1Q92681 617 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 CMKLR1Q99788 373 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 MCMBPQ9BTE3 642 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 RAB11FIP5Q9BXF6 653 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 POPDC3Q9HBV1 291 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 OGFRQ9NZT2 677 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 PDP2Q9P2J9 529 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 ENTPD2Q9Y5L3 495 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 IKBKGQ9Y6K9 419 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 CACNA1AO00555 2505 aa13.86□□□□□ -0.19
CTSA-219ENST00000607841 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 OR6C74A6NCV1 312 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 HGSO14964 777 aaPredicted RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 TOX3O15405 576 aaPredicted RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 ZBTB14O43829 449 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 ABHD2P08910 425 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 THRAP10827 490 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 SPINK2P20155 84 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 MAP4P27816 1152 aaKnown RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 RAB28P51157 221 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 PDX1P52945 283 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 TIAL1Q01085 375 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTSA-219ENST00000607841 USP10Q14694 798 aaKnown RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 IRGCQ6NXR0 463 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 ZNF574Q6ZN55 896 aaPredicted RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 TMPRSS9Q7Z410 1059 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 B3GNT8Q7Z7M8 397 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 NKAPQ8N5F7 415 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms