RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 NEK10Q6ZWH5 1172 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 UBE2R2Q712K3 238 aaPredicted RBP7.49□□□□□ -1.21
MSH6-211ENST00000606499 CLEC14AQ86T13 490 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 ZNF761Q86XN6 746 aaPredicted RBP7.49□□□□□ -1.21
MSH6-211ENST00000606499 RASGRP3Q8IV61 690 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 NAXDQ8IW45 347 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 TRIM48Q8IWZ4 208 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 KIAA2013Q8IYS2 634 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 ARL10Q8N8L6 244 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 GPR156Q8NFN8 814 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 MAPK15Q8TD08 544 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 SETD7Q8WTS6 366 aaKnown RBP7.49□□□□□ -1.21
MSH6-211ENST00000606499 JPH3Q8WXH2 748 aaPredicted RBP7.49□□□□□ -1.21
MSH6-211ENST00000606499 ASB11Q8WXH4 323 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 TFGQ92734 400 aaPredicted RBP7.49□□□□□ -1.21
MSH6-211ENST00000606499 DLG3Q92796 817 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 PTERQ96BW5 349 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 NXNL1Q96CM4 212 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 CXorf40BQ96DE9 158 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 PGM2Q96G03 612 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 PDLIM5Q96HC4 596 aaKnown RBP7.49□□□□□ -1.21
MSH6-211ENST00000606499 CAMK1GQ96NX5 476 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 NRTNQ99748 197 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 DERL2Q9GZP9 239 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 SYTL2Q9HCH5 934 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 IGSF5Q9NSI5 407 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 CPNE7Q9UBL6 633 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 PLAGL1Q9UM63 463 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 ASF1AQ9Y294 204 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 PCDHGB2Q9Y5G2 931 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 U3KQA8 63 aa7.49□□□□□ -1.21
MSH6-211ENST00000606499 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 GOLGA6L10A6NI86 522 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 OR5K4A6NMS3 321 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 GFYI3L273 518 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 CASC3O15234 703 aaKnown RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 SH3BP5O60239 455 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 FOXD2O60548 495 aaPredicted RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 PSIP1O75475 530 aaKnown RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 KLHL2O95198 593 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 C1orf105O95561 183 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 CATP04040 527 aaKnown RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 TPBGLP0DKB5 382 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 XRCC1P18887 633 aaPredicted RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 TFEBP19484 476 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 SLC26A3P40879 764 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 ATP6V0D1P61421 351 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 HHEXQ03014 270 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 SLC14A1Q13336 389 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 GPR18Q14330 331 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 GRB7Q14451 532 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 KRT33BQ14525 404 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 PHKG1Q16816 387 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 FAM83EQ2M2I3 478 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 PROX2Q3B8N5 592 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 INAVAQ3KP66 663 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 TECRLQ5HYJ1 363 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 C16orf46Q6P387 395 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 GUSBP11Q6P575 273 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 SBSNQ6UWP8 590 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 MBOAT1Q6ZNC8 495 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 DBX2Q6ZNG2 339 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 CDHR3Q6ZTQ4 885 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 SH2D5Q6ZV89 423 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 EXOC3L1Q86VI1 746 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 C17orf82Q86X59 251 aaPredicted RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 COL27A1Q8IZC6 1860 aaPredicted RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 ARL14Q8N4G2 192 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 LMNTD1Q8N9Z9 388 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 KNL1Q8NG31 2342 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 OR5K2Q8NHB8 316 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 ACMSDQ8TDX5 336 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 EXT2Q93063 718 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 ARL8AQ96BM9 186 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 CABS1Q96KC9 395 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 APOLD1Q96LR9 279 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 FOPNLQ96NB1 174 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 GPR78Q96P69 363 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 FERD3LQ96RJ6 166 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 SH3GL2Q99962 352 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 DUSP23Q9BVJ7 150 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 TRIT1Q9H3H1 467 aaKnown RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 C12orf65Q9H3J6 166 aaKnown RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 ALG9Q9H6U8 611 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 TMBIM4Q9HC24 238 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 SLC40A1Q9NP59 571 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 POT1Q9NUX5 634 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 UTP6Q9NYH9 597 aaKnown RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 TDRKHQ9Y2W6 561 aaKnown RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 HEBP2Q9Y5Z4 205 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 RNF215Q9Y6U7 377 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 DCHS1Q96JQ0 3298 aa7.48□□□□□ -1.21
MSH6-211ENST00000606499 EP300Q09472 2414 aaPredicted RBP7.48□□□□□ -1.21
MSH6-211ENST00000606499 ADAMTS20P59510 1910 aa7.47□□□□□ -1.21
MSH6-211ENST00000606499 TK2O00142 265 aa7.47□□□□□ -1.21
MSH6-211ENST00000606499 COPEO14579 308 aa7.47□□□□□ -1.21
MSH6-211ENST00000606499 PPM1DO15297 605 aa7.47□□□□□ -1.21
MSH6-211ENST00000606499 GLRA3O75311 464 aa7.47□□□□□ -1.21
MSH6-211ENST00000606499 SPAG7O75391 227 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms